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SCNpilot_solid_1_scaffold_4

Search features with annotation key words

Displaying items 91-120 of 402 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_4_90
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

101471..102382
DNA (912bp) protein (304aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002F926ED rbh
LysR family transcriptional regulator rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:CAP41167.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordete
SCNpilot_solid_1_scaffold_4_91
Achromobacter sp. RTa, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

102468..103718
DNA (1251bp) protein (417aa)
dadA3; D-amino acid dehydrogenase small subunit (EC:1.4.99.1) rbh
FAD dependent oxidoreductase n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4XB69_9BURK rbh
Amino acid dehydrogenase {ECO:0000313|EMBL:KGE00040.1}; TaxID=1532557 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp.
SCNpilot_solid_1_scaffold_4_92
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

103758..104315
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GQJ7_PUSST
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM23161.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_4_93
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

104490..106775
DNA (2286bp) protein (762aa)
Two-component response regulator n=2 Tax=Alcaligenes RepID=M5IWX5_9BURK
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CDM23972.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_4_94
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

106772..107890
DNA (1119bp) protein (373aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002D7879F
peptidoglycan binding protein
Putative peptidoglycan binding protein {ECO:0000313|EMBL:AEC21445.1}; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusi
SCNpilot_solid_1_scaffold_4_95
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

107894..109813
DNA (1920bp) protein (640aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pu
Two-component sensor protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GXL5_PUSST rbh
two-component sensor protein rbh
SCNpilot_solid_1_scaffold_4_96
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

109903..113835
DNA (3933bp) protein (1311aa)
Iron-sulfur binding oxidase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GQJ0_PUSST rbh
FAD/FMN-containing dehydrogenases {ECO:0000313|EMBL:CDM23160.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castell
FAD/FMN-containing dehydrogenases rbh
SCNpilot_solid_1_scaffold_4_97
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(113913..114467)
DNA (555bp) protein (185aa)
Adenine phosphoribosyltransferase (EC:2.4.2.7) rbh
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000
Adenine phosphoribosyltransferase n=1 Tax=Alcaligenes faecalis subsp. faecalis NCIB 8687 RepID=J0JGT9_ALCFA rbh
SCNpilot_solid_1_scaffold_4_98
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

114541..115527
DNA (987bp) protein (329aa)
Arabinose 5-phosphate isomerase (EC:5.3.1.13) rbh
Arabinose 5-phosphate isomerase {ECO:0000313|EMBL:CDM23158.1}; EC=5.3.1.13 {ECO:0000313|EMBL:CDM23158.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcalig
Uncharacterized protein n=1 Tax=Alcaligenes faecalis subsp. faecalis NCIB 8687 RepID=J0UPM3_ALCFA rbh
SCNpilot_solid_1_scaffold_4_99
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

115527..116129
DNA (603bp) protein (201aa)
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC:3.1.3.45) rbh
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase {ECO:0000313|EMBL:CDM23157.1}; EC=3.1.3.45 {ECO:0000313|EMBL:CDM23157.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Bur
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase n=2 Tax=Bordetella holmesii RepID=M5NJS6_9BORD
SCNpilot_solid_1_scaffold_4_100
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

116126..116743
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GQI6_PUSST
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CDM23156.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_4_101
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

116740..117348
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GQI5_PUSST
LptA, protein essential for LPS transport across the periplasm rbh
Lipopolysaccharide export system protein LptA {ECO:0000256|HAMAP-Rule:MF_01914}; Flags: Precursor;; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae
SCNpilot_solid_1_scaffold_4_102
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

117362..118144
DNA (783bp) protein (261aa)
ABC transporter n=1 Tax=Pusillimonas noertemannii RepID=UPI0002D41CA8 rbh
Lipopolysaccharide ABC transporter, ATP-binding protein LptB rbh
Lipopolysaccharide ABC transporter, ATP-binding protein LptB {ECO:0000313|EMBL:CDM23154.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castel
SCNpilot_solid_1_scaffold_4_103
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

118406..118732
DNA (327bp) protein (109aa)
RNA polymerase subunit sigma-54 n=1 Tax=Pusillimonas noertemannii RepID=UPI0002EEC0F2
Ribosome hibernation protein YhbH
Ribosome hibernation protein YhbH {ECO:0000313|EMBL:CDM23153.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castell
SCNpilot_solid_1_scaffold_4_104
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

118841..119338
DNA (498bp) protein (166aa)
Nitrogen regulatory IIA protein n=2 Tax=Alcaligenes RepID=M5IZP7_9BURK
PTS system nitrogen-specific IIA component, PtsN
PTS system nitrogen-specific IIA component, PtsN {ECO:0000313|EMBL:CDM23152.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;"
SCNpilot_solid_1_scaffold_4_105
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

119310..120248
DNA (939bp) protein (313aa)
HPr kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058411}; Short=HPrK/P {ECO:0000256|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SA
HPr kinase/phosphorylase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GQI1_PUSST rbh
HPr kinase/phosphorylase rbh
SCNpilot_solid_1_scaffold_4_106
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

120301..121176
DNA (876bp) protein (292aa)
UPF0042 nucleotide-binding protein PT7_3338 n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GQI0_PUSST rbh
Putative kinase rbh
Nucleotide-binding protein BN940_03376 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source
SCNpilot_solid_1_scaffold_4_107
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

121173..122165
DNA (993bp) protein (331aa)
Lipoprotein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GQH9_PUSST rbh
Rare lipoprotein A precursor rbh
Rare lipoprotein A {ECO:0000313|EMBL:CDM23149.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragr
SCNpilot_solid_1_scaffold_4_108
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(122153..123082)
DNA (930bp) protein (310aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule
16S rRNA (Cytidine(1402)-2'-O)-methyltransferase n=10 Tax=Bordetella RepID=V8UGV1_BORBO rbh
rRNA small subunit methyltransferase I rbh
SCNpilot_solid_1_scaffold_4_109
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

123118..123612
DNA (495bp) protein (165aa)
UPF0102 protein Bpet0439 n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=Y439_BORPD
Predicted endonuclease
UPF0102 protein BN940_03361 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellan
SCNpilot_solid_1_scaffold_4_110
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

123673..124260
DNA (588bp) protein (196aa)
Phosphoheptose isomerase {ECO:0000256|HAMAP-Rule:MF_00067, ECO:0000256|SAAS:SAAS00089187}; EC=5.3.1.28 {ECO:0000256|HAMAP-Rule:MF_00067, ECO:0000256|SAAS:SAAS00089180};; Sedoheptulose 7-phosphate isom
phosphoheptose isomerase n=1 Tax=Pusillimonas noertemannii RepID=UPI000319F4DE rbh
Phosphoheptose isomerase rbh
SCNpilot_solid_1_scaffold_4_111
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

124260..124988
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GQH5_PUSST
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CDM23145.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_4_112
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

124985..125479
DNA (495bp) protein (165aa)
Putative thioredoxin n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GQH4_PUSST
Cytochrome c-type biogenesis protein ResA
Cytochrome c-type biogenesis protein ResA {ECO:0000313|EMBL:CDM23144.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source=
SCNpilot_solid_1_scaffold_4_113
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

125476..126378
DNA (903bp) protein (301aa)
Acetylglutamate kinase (EC:2.7.2.8) rbh
Acetylglutamate kinase {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245375}; EC=2.7.2.8 {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245383};; N-acetyl-L-glutamate 5-phosphotra
acetylglutamate kinase n=1 Tax=Pusillimonas noertemannii RepID=UPI000374EBD0 rbh
SCNpilot_solid_1_scaffold_4_114
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

126379..127128
DNA (750bp) protein (250aa)
Pyridoxal-5'-phosphate phosphatase (EC:3.1.3.74) rbh
Pyridoxal-5'-phosphate phosphatase {ECO:0000313|EMBL:CDM23142.1}; EC=3.1.3.74 {ECO:0000313|EMBL:CDM23142.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alca
Putative hydrolase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GQH2_PUSST
SCNpilot_solid_1_scaffold_4_115
Bordetella parapertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(127058..127861)
DNA (804bp) protein (268aa)
Adenylyltransferase {ECO:0000313|EMBL:CCJ47629.1}; EC=2.7.7.- {ECO:0000313|EMBL:CCJ47629.1};; TaxID=1208660 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bord
molybdopterin biosynthesis protein MoeB n=1 Tax=Bordetella sp. FB-8 RepID=UPI000377B8E7 rbh
thiF; adenylyltransferase rbh
SCNpilot_solid_1_scaffold_4_116
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(127858..129366)
DNA (1509bp) protein (503aa)
Carboxyl-terminal protease (EC:3.4.21.102) rbh
Carboxyl-terminal protease {ECO:0000313|EMBL:CDM23141.1}; EC=3.4.21.102 {ECO:0000313|EMBL:CDM23141.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligena
Carboxy-terminal processing protease n=1 Tax=Alcaligenes faecalis subsp. faecalis NCIB 8687 RepID=J0JGW3_ALCFA rbh
SCNpilot_solid_1_scaffold_4_117
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(129449..130846)
DNA (1398bp) protein (466aa)
Peptidase family M23 n=1 Tax=Alcaligenes faecalis subsp. faecalis NCIB 8687 RepID=J0BA15_ALCFA rbh
Cell wall endopeptidase
Cell wall endopeptidase {ECO:0000313|EMBL:CDM23140.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_4_118
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(130848..131600)
DNA (753bp) protein (251aa)
Phosphoglycerate mutase (EC:5.4.2.-) rbh
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=2 Tax=Alcaligenes RepID=U1YAQ1_9BURK rbh
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01039}; Short=BPG-dependent PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=PGAM {ECO:0000256|HAMAP-Rule:MF_01039};;
SCNpilot_solid_1_scaffold_4_119
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

131689..132099
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI00030260EA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM23138.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
Displaying items 91-120 of 402 in total

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