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SCNpilot_solid_1_scaffold_4_103

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 118406..118732

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-54 n=1 Tax=Pusillimonas noertemannii RepID=UPI0002EEC0F2 similarity UNIREF
DB: UNIREF100
  • Identity: 77.6
  • Coverage: 107.0
  • Bit_score: 172
  • Evalue 2.00e-40
Ribosome hibernation protein YhbH similarity KEGG
DB: KEGG
  • Identity: 92.5
  • Coverage: 107.0
  • Bit_score: 198
  • Evalue 7.40e-49
Ribosome hibernation protein YhbH {ECO:0000313|EMBL:CDM23153.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castell similarity UNIPROT
DB: UniProtKB
  • Identity: 92.5
  • Coverage: 107.0
  • Bit_score: 198
  • Evalue 3.70e-48

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 327
ATGAGCCTGACAATCACCGGTCGTCATCTGGAAATCACCCCCGCCATCCGCGAATACGTCCACACCAAGACGGCTCGCGTCCTGCGGCACTTCGATCAGGTCATCGATACCCAGGTCATGCTCTCCATCGAACCGCTCAAGCACACGGCCGAAATCACCATGCGCCTGCGCGGCAAGGACCTGCACTGCGAAGCCTCGGATGACAATCTGTACGCGGCCATCGACCTGCTGGTCGACAAAGTCGACCGCCAGGTGATCAAATACAAATCCAAGGCTCAAACCTACGCGCACGAACCCCCGAAACGTCAGGAAATCCACGCTGAATAA
PROTEIN sequence
Length: 109
MSLTITGRHLEITPAIREYVHTKTARVLRHFDQVIDTQVMLSIEPLKHTAEITMRLRGKDLHCEASDDNLYAAIDLLVDKVDRQVIKYKSKAQTYAHEPPKRQEIHAE*