ggKbase home page

SCNpilot_solid_1_scaffold_4

Search features with annotation key words

Displaying items 61-90 of 402 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_4_60
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(68219..69088)
DNA (870bp) protein (290aa)
Segregation and condensation protein A n=1 Tax=Advenella kashmirensis W13003 RepID=V8QQ39_9BURK rbh
Segregation and condensation protein A rbh
Segregation and condensation protein A {ECO:0000256|SAAS:SAAS00093938, ECO:0000313|EMBL:CDM23190.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenacea
SCNpilot_solid_1_scaffold_4_61
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(69098..69313)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Alcaligenes faecalis subsp. faecalis NCIB 8687 RepID=J0JGR4_ALCFA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM23189.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_4_62
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

69421..70794
DNA (1374bp) protein (458aa)
Major facilitator transporter n=1 Tax=Alcaligenes sp. EGD-AK7 RepID=U7U6V9_9BURK rbh
Multidrug resistance protein B rbh
Multidrug resistance protein B {ECO:0000313|EMBL:CDM23188.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellani
SCNpilot_solid_1_scaffold_4_63
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(70818..71603)
DNA (786bp) protein (262aa)
Transcriptional regulator n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GR49_PUSST rbh
putative DNA-binding protein rbh
Putative DNA-binding protein {ECO:0000313|EMBL:CDM23187.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniel
SCNpilot_solid_1_scaffold_4_64
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(71663..75436)
DNA (3774bp) protein (1258aa)
5-methyltetrahydrofolate--homocysteine methyltransferase (EC:2.1.1.13) rbh
5-methyltetrahydrofolate--homocysteine methyltransferase {ECO:0000313|EMBL:CDM23185.1}; EC=2.1.1.13 {ECO:0000313|EMBL:CDM23185.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria;
Methionine synthase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GR48_PUSST rbh
SCNpilot_solid_1_scaffold_4_65
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

75743..75901
DNA (159bp) protein (53aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM23183.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_4_66
Sphingobium sp. HDIP04, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

76114..76326
DNA (213bp) protein (71aa)
Uncharacterized protein n=5 Tax=Sphingobium RepID=D4Z9E6_SPHJU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQB03288.1}; TaxID=428994 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp.
SCNpilot_solid_1_scaffold_4_67
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

76326..76646
DNA (321bp) protein (107aa)
PemK-like protein n=4 Tax=Sphingobium RepID=D4Z9E5_SPHJU
pemK; PemK-like protein
Growth inhibitor PemK {ECO:0000313|EMBL:EQB06765.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium bader
SCNpilot_solid_1_scaffold_4_68
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

77058..78947
DNA (1890bp) protein (630aa)
Putative outer membrane protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GR46_PUSST rbh
Outer membrane vitamin B12 receptor BtuB rbh
Outer membrane vitamin B12 receptor BtuB {ECO:0000313|EMBL:CDM23181.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="
SCNpilot_solid_1_scaffold_4_69
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

78950..79843
DNA (894bp) protein (298aa)
Periplasmic binding protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GR45_PUSST
Vitamin B12 ABC transporter, B12-binding component BtuF rbh
Vitamin B12 ABC transporter, B12-binding component BtuF {ECO:0000313|EMBL:CDM23180.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellanie
SCNpilot_solid_1_scaffold_4_70
Achromobacter arsenitoxydans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(79926..80945)
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0FCS3_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EHK64028.1}; TaxID=477184 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter arsen
SCNpilot_solid_1_scaffold_4_71
Achromobacter arsenitoxydans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(80951..82972)
DNA (2022bp) protein (674aa)
Uncharacterized protein n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0FCS2_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:EHK64027.1}; TaxID=477184 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter arsen
hypothetical protein
SCNpilot_solid_1_scaffold_4_72
Pseudomonas psychrotolerans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(82957..83808)
DNA (852bp) protein (284aa)
Putative uncharacterized protein n=1 Tax=Pseudomonas psychrotolerans L19 RepID=H0JAW3_9PSED
Putative uncharacterized protein {ECO:0000313|EMBL:EHK71730.1}; TaxID=1112217 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomo
ligand-binding protein SH3
SCNpilot_solid_1_scaffold_4_73
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

84077..84880
DNA (804bp) protein (268aa)
Thiazole synthase {ECO:0000256|HAMAP-Rule:MF_00443}; EC=2.8.1.10 {ECO:0000256|HAMAP-Rule:MF_00443};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenacea
thiazole synthase n=1 Tax=Pusillimonas noertemannii RepID=UPI0002D3BBF0 rbh
Thiazole biosynthesis protein ThiG rbh
SCNpilot_solid_1_scaffold_4_74
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

84994..85815
DNA (822bp) protein (274aa)
Hydroxymethylpyrimidine phosphate kinase ThiD (EC:2.7.4.7) rbh
Hydroxymethylpyrimidine phosphate kinase ThiD {ECO:0000313|EMBL:CDM23172.1}; EC=2.7.4.7 {ECO:0000313|EMBL:CDM23172.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderi
Putative phosphomethylpyrimidine kinase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GR43_PUSST rbh
SCNpilot_solid_1_scaffold_4_75
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

85899..86579
DNA (681bp) protein (227aa)
Protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77) rbh
Protein-L-isoaspartate O-methyltransferase {ECO:0000313|EMBL:CDM23171.1}; EC=2.1.1.77 {ECO:0000313|EMBL:CDM23171.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderial
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GR42_PUSST rbh
SCNpilot_solid_1_scaffold_4_76
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(86671..87231)
DNA (561bp) protein (187aa)
Putative sugar nucleotidyltransferase n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I130_BORPD
ADP-heptose synthase / D-glycero-beta-D-manno-heptose 7-phosphate kinase
ADP-heptose synthase / D-glycero-beta-D-manno-heptose 7-phosphate kinase {ECO:0000313|EMBL:CDM23170.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligena
SCNpilot_solid_1_scaffold_4_77
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(87228..88793)
DNA (1566bp) protein (522aa)
Probable protein kinase UbiB {ECO:0000256|SAAS:SAAS00063507}; EC=2.7.-.- {ECO:0000256|SAAS:SAAS00063486};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcalig
Ubiquinone biosynthesis protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GR35_PUSST rbh
Ubiquinone biosynthesis monooxygenase UbiB rbh
SCNpilot_solid_1_scaffold_4_78
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(88787..89512)
DNA (726bp) protein (242aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0003127285
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM23168.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_4_79
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(89735..90697)
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GR33_PUSST rbh
putative membrane protein rbh
Putative membrane protein {ECO:0000313|EMBL:CDM23167.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella
SCNpilot_solid_1_scaffold_4_80
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(90905..91669)
DNA (765bp) protein (255aa)
Ubiquinone/menaquinone biosynthesis methyltransferase UbiE / 2-heptaprenyl-1,4-naphthoquinone methyltransferase MenG (EC:2.1.1.163) rbh
Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE {ECO:0000256|HAMAP-Rule:MF_01813}; EC=2.1.1.163 {ECO:0000256|HAMAP-Rule:MF_01813, ECO:0000313|EMBL:CDM23166.1};; EC=2.1.1.201 {ECO:0000256|
Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE n=3 Tax=Bordetella holmesii RepID=M5NJT6_9BORD
SCNpilot_solid_1_scaffold_4_81
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

91800..92495
DNA (696bp) protein (232aa)
Phosphate regulon two-component response regulator n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GR30_PUSST rbh
Phosphate regulon transcriptional regulatory protein PhoB rbh
Phosphate regulon transcriptional regulatory protein PhoB {ECO:0000313|EMBL:CDM23165.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellan
SCNpilot_solid_1_scaffold_4_82
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

92492..93820
DNA (1329bp) protein (443aa)
Phosphate regulon sensor protein PhoR (EC:2.7.13.3) rbh
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121, ECO:0000313|EMBL:CDM23164.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkho
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002DE3E1A rbh
SCNpilot_solid_1_scaffold_4_83
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(93833..95341)
DNA (1509bp) protein (503aa)
Threonine dehydratase biosynthetic (EC:4.3.1.19) rbh
L-threonine dehydratase {ECO:0000256|RuleBase:RU362012}; EC=4.3.1.19 {ECO:0000256|RuleBase:RU362012, ECO:0000313|EMBL:CDM23163.1};; Threonine deaminase {ECO:0000256|RuleBase:RU362012}; TaxID=1437824 s
Threonine dehydratase biosynthetic n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GQJ8_PUSST rbh
SCNpilot_solid_1_scaffold_4_84
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

95521..97026
DNA (1506bp) protein (502aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7K9R0_PSEPS
diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:CDR90591.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudom
SCNpilot_solid_1_scaffold_4_85
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(97046..97912)
DNA (867bp) protein (289aa)
Class IV aminotransferase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GPU3_PUSST rbh
class IV aminotransferase rbh
Class IV aminotransferase {ECO:0000313|EMBL:AEC21798.1}; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusillimonas sp.
SCNpilot_solid_1_scaffold_4_86
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(97973..98707)
DNA (735bp) protein (245aa)
ABC transporter n=1 Tax=Pusillimonas noertemannii RepID=UPI0002F6EB3D rbh
Arginine ABC transporter ATP-binding protein {ECO:0000313|EMBL:ETF00717.1}; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella ka
gltL; glutamate/aspartate transport ATP-binding protein GltL rbh
SCNpilot_solid_1_scaffold_4_87
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(98723..99412)
DNA (690bp) protein (230aa)
glutamate/aspartate transporter permease GltK n=1 Tax=Pusillimonas noertemannii RepID=UPI00031BB5BC rbh
glutamate/aspartate transport system permease
Glutamate/aspartate transport system permease protein {ECO:0000313|EMBL:AEC21320.1}; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.
SCNpilot_solid_1_scaffold_4_88
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(99423..100163)
DNA (741bp) protein (247aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002D8C1A0 rbh
polar amino acid ABC transporter inner membrane subunit; K10003 glutamate/aspartate transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
glutamate/aspartate transport system permease
SCNpilot_solid_1_scaffold_4_89
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(100294..101199)
DNA (906bp) protein (302aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0003611683 rbh
amino acid ABC transporter substrate-binding protein
Amino-acid ABC transporter binding protein {ECO:0000313|EMBL:AEC21322.1}; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="
Displaying items 61-90 of 402 in total

View Taxonomy