ggKbase home page

SCNpilot_solid_1_scaffold_4_109

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 123118..123612

Top 3 Functional Annotations

Value Algorithm Source
UPF0102 protein Bpet0439 n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=Y439_BORPD similarity UNIREF
DB: UNIREF100
  • Identity: 54.4
  • Coverage: 160.0
  • Bit_score: 157
  • Evalue 1.00e-35
Predicted endonuclease similarity KEGG
DB: KEGG
  • Identity: 55.2
  • Coverage: 192.0
  • Bit_score: 180
  • Evalue 3.20e-43
UPF0102 protein BN940_03361 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellan similarity UNIPROT
DB: UniProtKB
  • Identity: 55.2
  • Coverage: 192.0
  • Bit_score: 180
  • Evalue 1.60e-42

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 495
ATGTCCATCGATTCCCACGCCCGGGCGCAAGAGGCCCAGCGCCTGGCCCGGCAACGGCGCCAGCGGGCGCTGCGCGCCGCCGCCCGCCAGCCGGCGCCGCAGGCGACGCCGGAGGCGGCGTCCGCCGCGGCGGGGTCGCCGACGCAGCGCCGGGGACACGCCGCCGAAACCCGGGCGGCCCTGCATCTGGGCGCCCGAGGCGTGCCGACGCTGGCCCGCAACCTGCGCTGCAGGGCCGGCGAGATCGACCTGGTCGCCCGGGACGGCCCCGTCCTGGTCTTCGTCGAGGTGCGCCAGCGCCGCGACCGGCGCTACGGCGGCGCCGCCGCCAGTGTAAACCGCGCCAAGCAGGCCCGCCTCATCCGGGCGGCCCGCTACTTCCTGCCCGCTCTGAGCCGCGCCCACTTCGCAGGCGTCCAGCCCCCCTGCCGCTTCGACGTGGTCAGCATCGAAGACGGCCGGATCGACTGGATCCGGGACGCCTTCCGGATGTGA
PROTEIN sequence
Length: 165
MSIDSHARAQEAQRLARQRRQRALRAAARQPAPQATPEAASAAAGSPTQRRGHAAETRAALHLGARGVPTLARNLRCRAGEIDLVARDGPVLVFVEVRQRRDRRYGGAAASVNRAKQARLIRAARYFLPALSRAHFAGVQPPCRFDVVSIEDGRIDWIRDAFRM*