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SCNpilot_solid_1_scaffold_4_156

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(172108..173196)

Top 3 Functional Annotations

Value Algorithm Source
Putative periplasmic solute-binding protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IRK7_BORPD similarity UNIREF
DB: UNIREF100
  • Identity: 78.5
  • Coverage: 363.0
  • Bit_score: 601
  • Evalue 7.70e-169
  • rbh
TRAP transporter solute receptor similarity KEGG
DB: KEGG
  • Identity: 93.6
  • Coverage: 362.0
  • Bit_score: 711
  • Evalue 8.80e-203
  • rbh
TRAP transporter solute receptor {ECO:0000313|EMBL:CDM23084.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castella similarity UNIPROT
DB: UniProtKB
  • Identity: 93.6
  • Coverage: 362.0
  • Bit_score: 711
  • Evalue 4.40e-202

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1089
ATGCAACGTCGTTCCTTCCTCAAGAAGGCCGCCTTTGGCGTGGCCGCCGGCGGCACCACCCTCGCCGCTCCCGTCTTCGCCCAGGATGCGCCCACCCTCCAGTGGCGCCTGGCTTCCAGTTTTCCGCGCAGTGCGGATGCCATCTACTCCGGCGGTGAAAACGTCGCAAAATTCGTGTCCGAAGCAACGGGCGGGAAATTCCAGATCCGCGCCTTCCCCGGCGGTGAAATCCTGCCGGCGCTGGGCGTGCTCGATGGCGTGCAGAACGGCACCGTCGAATGCGGCCATACCGCGTCCTACTATTACTTCGGCAAGGATCCGGCCCTGTGCTTCGACGGCGCCGTGCCTTTCGGCCTGAACACGCGCCAGTACAACGCCTGGGTGCGCCATGGCGGCGGCCTGAAGGTCCTGCGCGACCTGTTCGCCAAGTTCAACATCGTCAATTTCCCCTGCGGCTACACGGGCACCCAGATGGGCGGCTGGTTCCGCAAGGAAATCAAGACCGTCGAAGACCTGAAGGGCCTGAAATTCCGCACGGCCGCCTTCGCCGGCGCCGTGCTGATGAAGCTGGGCGTCGTCCCGCAGCAGATCGCGGGCGGCGACATCTATCCCTCGCTGGAAAAGGGCACCATCGACGCCGCCGAATGGATCGGCCCCTACGATGACGAGAAGATGGGCTTCCATCGGGTCGCGCCGTACTACTACTTCCCGGGCTGGTGGGAAGGCACGCTGCAGGTGTCCCTGTACGTGAACAAGGACAAATACGAGGCCCTGCCCAAGCACTATCAGGCCGTGCTGGACCAGGCGTCCGCGCTGGCGACCAACACCATGATCGCCACCTACGACGCCGAGAACCCCAACGCCCTGAAGCGCCTGATCGGCGAAGGCGCCAAGCTGCGGGCCTTCCCCAAGCCCGTCATGGACGCCTGCTACAAGGCCGCCAAGGACACCTACGCCGAACTCTCGGCCAAGGATCCCAACTTCAAGAAGATCCACGACGCCTACATGGGCTTCCGCGACCACGAAATTCCCTGGTTCCGGATCGCCGAAGGCAGCTTCGACCAGTACATGGCCACGGCAGCGAAATAA
PROTEIN sequence
Length: 363
MQRRSFLKKAAFGVAAGGTTLAAPVFAQDAPTLQWRLASSFPRSADAIYSGGENVAKFVSEATGGKFQIRAFPGGEILPALGVLDGVQNGTVECGHTASYYYFGKDPALCFDGAVPFGLNTRQYNAWVRHGGGLKVLRDLFAKFNIVNFPCGYTGTQMGGWFRKEIKTVEDLKGLKFRTAAFAGAVLMKLGVVPQQIAGGDIYPSLEKGTIDAAEWIGPYDDEKMGFHRVAPYYYFPGWWEGTLQVSLYVNKDKYEALPKHYQAVLDQASALATNTMIATYDAENPNALKRLIGEGAKLRAFPKPVMDACYKAAKDTYAELSAKDPNFKKIHDAYMGFRDHEIPWFRIAEGSFDQYMATAAK*