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SCNpilot_solid_1_scaffold_4_163

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(178930..180009)

Top 3 Functional Annotations

Value Algorithm Source
Peptide chain release factor 1 n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=RF1_BORPD similarity UNIREF
DB: UNIREF100
  • Identity: 79.9
  • Coverage: 359.0
  • Bit_score: 576
  • Evalue 1.50e-161
  • rbh
Peptide chain release factor 1 similarity KEGG
DB: KEGG
  • Identity: 92.1
  • Coverage: 355.0
  • Bit_score: 651
  • Evalue 1.40e-184
  • rbh
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093, ECO:0000313|EMBL:CDM23077.1}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaprote similarity UNIPROT
DB: UniProtKB
  • Identity: 92.1
  • Coverage: 355.0
  • Bit_score: 651
  • Evalue 6.90e-184

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1080
ATGAAAAGCTCGATGCGCAGCCGCCTGGAACAGCTCAGCCACCGCTTGGCCGAGATCGATGCCATGCTGGCGGAGCCCGACAGCGCCGACGACATGGACCGCTTTCGCAAGCTCACGCGGGAACGTGCCGAACTGGACCCCGTGGTGCAGGCGTTCGGATCCTGGGAACGGGCCTGCGCCGACCGGGACGCGGCCCGCGAGATGCTGTCCGATCCGGACATGAAGACCCTGGCGGAAGAGGAACTGGCGGGGGCGGACGAGCGCATCGAGCAATTGGAAGCCGATCTGCAGATCCTGCTGCTGCCCAAGGACCCGGACGATGACCGCAGCGTCTTTCTGGAAGTCCGCGCCGGGACGGGCGGCGACGAAAGCGCCCTGTTCGCGGGCGACTTGCTGCGCATGTACACGCGCTACGCGGAAATCCGGGGCTGGCGGGTGGAACTGATGTCCGAGAGCGCCGCCGAACTGGGCGGTTACAAGGAAGTCATCGCCCACATTGAAGGCGACGGCGTGTACGGCCAGCTGAAGTTCGAGTCCGGGGCGCACCGGGTGCAGCGCGTGCCGGAAACCGAATCCCAGGGGCGGGTGCACACCTCGGCCTGCACCGTTGCGGTGATGCCGGAGGCCGATGCCCAGTCGGACATCCAGATCAATGCCAACGACCTGCGCATCGACACCTTTCGCGCCAGCGGCGCGGGCGGGCAGCACATCAACAAGACCGATTCCGCCGTGCGGATCACCCACCTGCCCACCGGCCTGGTGGTGGAATGCCAGGACGACCGTTCGCAGCACCGCAACAAGGACAAGGCCATGCAGGTGCTGGCGGCGCGCCTGAAAGACCGCCAGCAGCAGGAAATCCATGCCCGCGAGGCCGCGCAGCGCAAGAGCCTGGTGGGGTCGGGCGACCGGTCCGAGCGCATCCGCACCTACAATTTTCCCCAGGGGCGGGTGACGGACCACCGCATCAATCTGACGCTGTACAAGCTGGCCCAGGTGATGGACGGCGATCTGGACGAAGTCACCAACGCCCTGCTGGCCGAGCACCAGGCCGAACAGCTGGCCTCCCTGGCGCTGGACTAG
PROTEIN sequence
Length: 360
MKSSMRSRLEQLSHRLAEIDAMLAEPDSADDMDRFRKLTRERAELDPVVQAFGSWERACADRDAAREMLSDPDMKTLAEEELAGADERIEQLEADLQILLLPKDPDDDRSVFLEVRAGTGGDESALFAGDLLRMYTRYAEIRGWRVELMSESAAELGGYKEVIAHIEGDGVYGQLKFESGAHRVQRVPETESQGRVHTSACTVAVMPEADAQSDIQINANDLRIDTFRASGAGGQHINKTDSAVRITHLPTGLVVECQDDRSQHRNKDKAMQVLAARLKDRQQQEIHAREAAQRKSLVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLAQVMDGDLDEVTNALLAEHQAEQLASLALD*