ggKbase home page

SCNpilot_solid_1_scaffold_4_356

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(380865..382196)

Top 3 Functional Annotations

Value Algorithm Source
Shikimate transporter n=1 Tax=Achromobacter xylosoxidans C54 RepID=E5U8K5_ALCXX similarity UNIREF
DB: UNIREF100
  • Identity: 76.2
  • Coverage: 421.0
  • Bit_score: 668
  • Evalue 6.30e-189
  • rbh
shikimate transporter ShiA similarity KEGG
DB: KEGG
  • Identity: 98.3
  • Coverage: 417.0
  • Bit_score: 818
  • Evalue 1.10e-234
  • rbh
Shikimate transporter ShiA {ECO:0000313|EMBL:CDM25851.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella similarity UNIPROT
DB: UniProtKB
  • Identity: 98.3
  • Coverage: 417.0
  • Bit_score: 818
  • Evalue 5.30e-234

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1332
ATGCAAAAGCAACAATCTTCTGGCAGGCCGGGCAGGCCTGGGTCATCAAGGCATTACGTGACCGCTGGTGTCGCCAGCATGCTGGGGACCACGATCGAGTGGTATGACTTTTTTCTGTATGGAACGGCAGCCGCCCTGATTTTCAACAAGATATTCTTTCCGGCGTTCGATCCCCTGATGGGGACGCTGGCGGCGTTTGCCACGTATTCGGTAGGTTTTTTCGCCCGTCCGCTGGGCGGGATCGTGTTCGGGCATTTCGGCGACCGGGTCGGACGCAAGTCCATGCTGCTCATTACCCTGGTGATGATGGGAGTGCCCACCATCCTGATCGGCCTGATTCCGTCTTACGACAGCATCGGCTATTGGGCTGCCATTTTGCTGGTCATCCTGCGATTTCTGCAGGGCGTGGCCGTCGGTGGCGAATGGGGGGGCGCCGTGCTGATGGCGGTGGAACACGCCCCCGAAGGCAAGAAAGGCTTTTTCGGCAGTTTGCCCCAGGCCGGGGTGGCGCCGGGCCTGCTTCTGTCGTCTTTTGCCATGGCCGCTGTCGCGGCGTTGCCCGAAGAGCAGATGCTCAGCTGGGGCTGGCGCCTGCCGTTTCTGGCCAGCGTGGTGCTGTTGCTGGTGGGTTGGTTCATTCGTATCCGCGTGGCCGAGTCGCCCGATTTCGAGGCCATGCAATCCGCCGGCAAGAAAGCCGAAGTGCCTCTGCGCACGGTGCTCACCAAGCATCCGCGCAGCGTCTTGCTGGTGATAGGCGCCCGTTTGGGCGAAGTCACCTGGTTCTATACCGTGGTGACGTTCGCCCTGGCCTATGCCACCGGGACATTGGGGATTCCGAAAATCACGGTGCTCGATGCCATCATGTGGGGGGCGGCAGTCTCTTTTTTCACCATGCCTTTGTGCGGCATGCTGGGCGATCGCATCGGGCATAAGTACGTCTTCATGCTTGGCGCCATCGGCGTGCTGATCGTCGGCAATGTGTTTTTCGACCTGCTGGCGACTGCTGAATTCGGCATGATCACCCTGGGCATGGTGCTGGCCATCGGCTGCGTCTATGCCATGCTCTACGGCCCCGAAGGCAGCCTGTTTTCGAGCCAGTTCCCGCCCGAGGTCCGCTATAGCGGCATTTCCCTCGCAGTGCAGATTTCCGGCGCCATCGGCGGCGGTCTGGCTCCCTTGGTGGCTACGTGGCTGCTGGCCTTGGGCGACGGCAATCCGCGCTACGTGGTGTGGTACCTGCTCAGCCTGGGCGCCATCGCCGGCGTGTGCGCCTGGCGGATGCGTTCGCGGTCCCTCGTGCTCGAAGGGCGGCAATATGAAGCGGCTTGA
PROTEIN sequence
Length: 444
MQKQQSSGRPGRPGSSRHYVTAGVASMLGTTIEWYDFFLYGTAAALIFNKIFFPAFDPLMGTLAAFATYSVGFFARPLGGIVFGHFGDRVGRKSMLLITLVMMGVPTILIGLIPSYDSIGYWAAILLVILRFLQGVAVGGEWGGAVLMAVEHAPEGKKGFFGSLPQAGVAPGLLLSSFAMAAVAALPEEQMLSWGWRLPFLASVVLLLVGWFIRIRVAESPDFEAMQSAGKKAEVPLRTVLTKHPRSVLLVIGARLGEVTWFYTVVTFALAYATGTLGIPKITVLDAIMWGAAVSFFTMPLCGMLGDRIGHKYVFMLGAIGVLIVGNVFFDLLATAEFGMITLGMVLAIGCVYAMLYGPEGSLFSSQFPPEVRYSGISLAVQISGAIGGGLAPLVATWLLALGDGNPRYVVWYLLSLGAIAGVCAWRMRSRSLVLEGRQYEAA*