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SCNpilot_solid_1_scaffold_4

Search features with annotation key words

Displaying items 331-360 of 402 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_4_329
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(350457..351542)
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GT94_PUSST rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CDM25825.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_4_330
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(351597..352514)
DNA (918bp) protein (306aa)
ABC-type transport system, permease component n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GT93_PUSST rbh
Putative deoxyribose-specific ABC transporter, permease protein rbh
Putative deoxyribose-specific ABC transporter, permease protein {ECO:0000313|EMBL:CDM25826.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Cas
SCNpilot_solid_1_scaffold_4_331
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(352517..353581)
DNA (1065bp) protein (355aa)
Transmembrane ABC transporter protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GT92_PUSST rbh
inner-membrane translocator rbh
Inner-membrane translocator {ECO:0000313|EMBL:CDM25827.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniell
SCNpilot_solid_1_scaffold_4_332
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(353574..355106)
DNA (1533bp) protein (511aa)
ABC-type transport systems, ATPase component n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GT91_PUSST rbh
Sugar ABC transporter, ATP-binding protein rbh
Sugar ABC transporter, ATP-binding protein {ECO:0000313|EMBL:CDM25828.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source
SCNpilot_solid_1_scaffold_4_333
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(355358..355993)
DNA (636bp) protein (212aa)
Leucine export protein LeuE n=1 Tax=Pseudomonas aeruginosa M9A.1 RepID=U8F177_PSEAI
L-lysine permease rbh
L-lysine permease {ECO:0000313|EMBL:CDM25829.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragra
SCNpilot_solid_1_scaffold_4_334
R_Burkholderiales_63_240, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(356157..356696)
DNA (540bp) protein (180aa)
MIP-(Macrophage infectivity potentiator)-like protein n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7SWE0_ALCXX
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_63_240_curated
carboxymuconolactone decarboxylase
SCNpilot_solid_1_scaffold_4_335
R_Burkholderiales_63_240, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

356820..357713
DNA (894bp) protein (298aa)
AraC family transcriptional regulator n=1 Tax=Comamonas sp. B-9 RepID=UPI0003958CD2
Transcriptional regulator, AraC family Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_63_240_curated
Transcriptional regulator, AraC family
SCNpilot_solid_1_scaffold_4_336
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(357763..359337)
DNA (1575bp) protein (525aa)
NADH dehydrogenase n=1 Tax=Pusillimonas noertemannii RepID=UPI0002F424C8 rbh
Alkyl hydroperoxide reductase protein F rbh
Alkyl hydroperoxide reductase protein F {ECO:0000313|EMBL:CDM25836.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="C
SCNpilot_solid_1_scaffold_4_337
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(359499..360062)
DNA (564bp) protein (188aa)
Alkyl hydroperoxide reductase n=2 Tax=Alcaligenes RepID=M5J2Y0_9BURK rbh
Alkyl hydroperoxide reductase protein C rbh
Alkyl hydroperoxide reductase protein C {ECO:0000313|EMBL:CDM25837.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="C
SCNpilot_solid_1_scaffold_4_338
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

360453..361001
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TW27_9PROT
Photosystem reaction center subunit H {ECO:0000313|EMBL:KGD86132.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhi
PRC-barrel domain-containing protein
SCNpilot_solid_1_scaffold_4_339
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

361099..361245
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9D5R8_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EKU79628.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG
hypothetical protein
SCNpilot_solid_1_scaffold_4_340
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(361345..361668)
DNA (324bp) protein (108aa)
Putative lipoprotein n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82XW6_NITEU
lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:CAD84040.1}; TaxID=228410 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas europa
SCNpilot_solid_1_scaffold_4_341
Achromobacter sp. RTa, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(361801..363114)
DNA (1314bp) protein (438aa)
Putative membrane protein 48 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HPZ2_ACHXA
Membrane protein {ECO:0000313|EMBL:KGD87957.1}; TaxID=1532557 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp. RTa.;"
hypothetical protein
SCNpilot_solid_1_scaffold_4_342
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

363327..364028
DNA (702bp) protein (234aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28) rbh
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:CDM25840.1}; EC=3.5.1.28 {ECO:0000313|EMBL:CDM25840.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alca
Cell wall hydrolase/autolysin n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7SYQ1_ALCXX
SCNpilot_solid_1_scaffold_4_343
Achromobacter arsenitoxydans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(364041..365249)
DNA (1209bp) protein (403aa)
Pectate lyase family protein n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0FD27_9BURK rbh
Pectate lyase family protein {ECO:0000313|EMBL:EHK63820.1}; TaxID=477184 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter
Pectate lyase precursor rbh
SCNpilot_solid_1_scaffold_4_344
Achromobacter arsenitoxydans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(365259..367178)
DNA (1920bp) protein (640aa)
Vi polysaccharide export protein VexE n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0FD26_9BURK rbh
Vi polysaccharide export protein VexE {ECO:0000313|EMBL:EHK63819.1}; TaxID=477184 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achro
tetratricopeptide repeat family protein 2 rbh
SCNpilot_solid_1_scaffold_4_345
Achromobacter arsenitoxydans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(367171..368223)
DNA (1053bp) protein (351aa)
Capsule polysaccharide export inner-membrane protein n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0FD25_9BURK rbh
Capsule polysaccharide export inner-membrane protein {ECO:0000313|EMBL:EHK63818.1}; TaxID=477184 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;
capsule polysaccharide export inner-membrane protein rbh
SCNpilot_solid_1_scaffold_4_346
Achromobacter arsenitoxydans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(368324..369061)
DNA (738bp) protein (246aa)
Sugar ABC transporter ATPase n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0FD24_9BURK rbh
Sugar ABC transporter ATPase {ECO:0000313|EMBL:EHK63817.1}; TaxID=477184 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter
sugar ABC transporter ATPase rbh
SCNpilot_solid_1_scaffold_4_347
Achromobacter arsenitoxydans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(369089..370435)
DNA (1347bp) protein (449aa)
ABC transporter n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0FD23_9BURK rbh
ABC transporter {ECO:0000313|EMBL:EHK63816.1}; TaxID=477184 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter arsenitoxydan
ABC transporter
SCNpilot_solid_1_scaffold_4_348
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(370437..371588)
DNA (1152bp) protein (384aa)
Polysaccharide biosynthesis/export protein n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4X5Z6_9BURK rbh
Membrane protein {ECO:0000313|EMBL:KGY27478.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxydans xy
polysaccharide biosynthesis/export family protein rbh
SCNpilot_solid_1_scaffold_4_349
Achromobacter sp. RTa, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(371712..373769)
DNA (2058bp) protein (686aa)
Glycosyl transferase group 1 n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0FD21_9BURK rbh
Glycosyl transferase {ECO:0000313|EMBL:KGE00026.1}; TaxID=1532557 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp. RTa
glycosyl transferase group 1 rbh
SCNpilot_solid_1_scaffold_4_350
Achromobacter arsenitoxydans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(373766..376246)
DNA (2481bp) protein (827aa)
Tetratricopeptide repeat family protein 1 n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0FD20_9BURK rbh
Tetratricopeptide repeat family protein 1 {ECO:0000313|EMBL:EHK63813.1}; TaxID=477184 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="A
tetratricopeptide repeat family protein 1 rbh
SCNpilot_solid_1_scaffold_4_351
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

376640..376927
DNA (288bp) protein (96aa)
molecular chaperone GroES n=1 Tax=Bordetella sp. FB-8 RepID=UPI0003775CB0
Heat shock protein 60 family co-chaperone GroES
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=1437824 spec
SCNpilot_solid_1_scaffold_4_352
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

376962..378608
DNA (1647bp) protein (549aa)
60 kDa chaperonin n=3 Tax=Alcaligenes RepID=M5J3M3_9BURK rbh
Heat shock protein 60 family chaperone GroEL rbh
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1437824 spec
SCNpilot_solid_1_scaffold_4_353
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(378756..379706)
DNA (951bp) protein (317aa)
Oxidoreductase/oxygenase, vanB family n=1 Tax=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) RepID=Q1LFU7_RALME rbh
Flavodoxin reductases (ferredoxin-NADPH reductases) family 1; Vanillate O-demethylase oxidoreductase rbh
Flavodoxin reductases (Ferredoxin-NADPH reductases) family 1 Vanillate O-demethylase oxidoreductase {ECO:0000313|EMBL:CDM25848.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria;
SCNpilot_solid_1_scaffold_4_354
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(379708..380235)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D3L3_BRAJP
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CDM25849.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_4_355
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(380285..380878)
DNA (594bp) protein (198aa)
2-Hydroxychromene-2-carboxylate isomerase n=1 Tax=Achromobacter xylosoxidans C54 RepID=E5U8K6_ALCXX
2-hydroxychromene-2-carboxylate isomerase rbh
2-hydroxychromene-2-carboxylate isomerase {ECO:0000313|EMBL:CDM25850.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source=
SCNpilot_solid_1_scaffold_4_356
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(380865..382196)
DNA (1332bp) protein (444aa)
Shikimate transporter n=1 Tax=Achromobacter xylosoxidans C54 RepID=E5U8K5_ALCXX rbh
shikimate transporter ShiA rbh
Shikimate transporter ShiA {ECO:0000313|EMBL:CDM25851.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella
SCNpilot_solid_1_scaffold_4_357
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(382286..383053)
DNA (768bp) protein (256aa)
aldolase n=1 Tax=Oligella ureolytica RepID=UPI00037A1C70 rbh
class II aldolase rbh
Class II aldolase {ECO:0000313|EMBL:CDM25852.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragra
SCNpilot_solid_1_scaffold_4_358
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(383139..384020)
DNA (882bp) protein (294aa)
Transcriptional regulator, LysR-family n=2 Tax=Alcaligenes xylosoxydans xylosoxydans RepID=R4XTV9_ALCXX
transcriptional regulator, LysR-family rbh
Transcriptional regulator, LysR-family {ECO:0000313|EMBL:CDM25853.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Ca
Displaying items 331-360 of 402 in total

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