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SCNpilot_solid_1_scaffold_4_358

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(383139..384020)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR-family n=2 Tax=Alcaligenes xylosoxydans xylosoxydans RepID=R4XTV9_ALCXX similarity UNIREF
DB: UNIREF100
  • Identity: 56.9
  • Coverage: 290.0
  • Bit_score: 311
  • Evalue 7.60e-82
transcriptional regulator, LysR-family similarity KEGG
DB: KEGG
  • Identity: 88.4
  • Coverage: 293.0
  • Bit_score: 493
  • Evalue 3.00e-137
  • rbh
Transcriptional regulator, LysR-family {ECO:0000313|EMBL:CDM25853.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Ca similarity UNIPROT
DB: UniProtKB
  • Identity: 88.4
  • Coverage: 293.0
  • Bit_score: 493
  • Evalue 1.50e-136

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 882
ATGGACAGTCTGGACCGGCCCGTCCGGTATTTTCTGAAGATCGCGGAATTGTCTTCGCTGTCGCGCGCGGCCGAAGATCTGGGCCTGAGCCAATCCGGCCTGAGCCGCACGCTGGCCTCTCTGGAGTCCTATCTGGGCAAACCGCTGTTTCTGCGCACCGGCAGGGGCATGGAATTGACCGAGGCGGGCCGCAAACTGGCCGAGGTGGCTGCGCCGGCCTATACGATGGTCGATGACATGCTGGTGCAACTGCGTGACAGGGAAGGCCTGACGCAAGGCAGCTTGAGCATCGCCATCATTCATACCGTCAGCTACTATTTTGCCTCCTCCCTGCTGTCGCGCTTTGTCGGCAAACATTCTCAGGTCAACCTGAATGTCCTGGCGCGCAGCTCTCCGGAAGTGGTCGAATTGGTGGAAAGGGGCAAGGCCGATATCGGCCTGGTCTATGACTCGGCCGTGGCCAGTGACAAACTGGAATCGACCCCGCTGTTCATGGACGAGATGTGTCTCATTGCGCGTGAGCAGGATCTGCCTGACCGGGTGCCTGTGGATCTTGCCAGTTCATCTTTGATGCTGGTGGGCTTTCCGGAGCCCTACGCTTTGCGCCGCATGCTGAAAAGCGCCGGGTTGGACGAGCGCGTGGTCGTGGTGGCGGAAACGGTCGATGCCATGCTGCAGCTCAGCGCGACAGGCATCGGCGCCTGCGTGCTGCCGACCAATATCCCGACGTCGCTGTTGCGGGACTATGGCCTGGTCAAGACTCCCTTGCAGGCGCCCGGGCTGCAACGCCTGGTGGTGGCCATCGTGCGCAGGGACGTCGGCGCCGACAGCCTCGCGCGCCAGTTGCTGAGCATGGCTCGGACCATTTCCACAATGGCATAG
PROTEIN sequence
Length: 294
MDSLDRPVRYFLKIAELSSLSRAAEDLGLSQSGLSRTLASLESYLGKPLFLRTGRGMELTEAGRKLAEVAAPAYTMVDDMLVQLRDREGLTQGSLSIAIIHTVSYYFASSLLSRFVGKHSQVNLNVLARSSPEVVELVERGKADIGLVYDSAVASDKLESTPLFMDEMCLIAREQDLPDRVPVDLASSSLMLVGFPEPYALRRMLKSAGLDERVVVVAETVDAMLQLSATGIGACVLPTNIPTSLLRDYGLVKTPLQAPGLQRLVVAIVRRDVGADSLARQLLSMARTISTMA*