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SCNpilot_solid_1_scaffold_3_276

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(295238..296152)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Pseudomonas viridiflava UASWS0038 RepID=K6C5K5_PSEVI similarity UNIREF
DB: UNIREF100
  • Identity: 53.5
  • Coverage: 299.0
  • Bit_score: 313
  • Evalue 2.10e-82
  • rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:EKG38733.1}; TaxID=1154762 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas s similarity UNIPROT
DB: UniProtKB
  • Identity: 54.9
  • Coverage: 293.0
  • Bit_score: 313
  • Evalue 3.80e-82
regulatory protein LysR similarity KEGG
DB: KEGG
  • Identity: 54.9
  • Coverage: 293.0
  • Bit_score: 312
  • Evalue 1.70e-82

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Taxonomy

Pseudomonas syringae → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 915
ATGGACCGCTTGATGGCCGCTCGGGTATTCGTCACCATTGCACAACGCGGCAGCCTGACGGCTGCGGCCTCCACCCTGCAGATGTCGCGGGCCATGGTGACCCGGTACCTGGCCGAGATGGAAAATTGGGCCGGGGCGCGCCTGTTCCACCGCAATACCCGCCATCTGGGGCTGACCCTGATCGGCCAGCAGATGCTGGACCGCAGCCTGGGATTGCTGACGCTGGCCGACCAGCTGCCCTGGCGGTCGGTGGATGAGGACGCGCAGATGCAGGGCGTCCTGCGCGTGGCCTGTCCCCAGGCCCTGGCGCAGACGCTGCTGGCGGGGCTGGTCAGCCGGTTCCTGGCGCTGCATCCCGAATCCGCCATCGAATTGCTGGTGGCCGAAAGCACGATGGACCTGGTGGCCGAGGGCATCGACATGGCTGTTCGCGTCAGCAATTCCCTGGATCCCGTCCTGATCGCCCGTCCGCTGGGGGTGTGCGGTTTCGTCCTGTGCGCGGCGCCCGCCTACCTGGCCCGGCGCGGGCGCCCGGCCGGCCTGGGAGACCTGGTGGACCACAACTGCCTGACCTACACCTATTTCGGCCGCAGCCTGTGGCGTTTCACCCTGGGGGGCGAAATCGTGGAGGTGCCGGTCAGCGGCAATCTCAGCGCCAATGACAGCATGACCCTGCTGAGCGCCACCCAGGCGGGGGCGGGCATCAGCCTGATGCCCTGGCCCGCCGCCAAGGCTCCGGTGGCGCGGGGCGAACTGGAAATCCTGCTGCCCGAGGCCGAGCCCCAGAGCCTGGGCATCCATGCCGTCTATGCCAGCCGGGAACACCAGTCCGTGCTGATGCGCCGGTTCCTGGATTTCCTGGTGGATGCCTTCGCGCGGCCCGAGGTGTCCCGGGGGGTCGCGCAGGCCTGTTGA
PROTEIN sequence
Length: 305
MDRLMAARVFVTIAQRGSLTAAASTLQMSRAMVTRYLAEMENWAGARLFHRNTRHLGLTLIGQQMLDRSLGLLTLADQLPWRSVDEDAQMQGVLRVACPQALAQTLLAGLVSRFLALHPESAIELLVAESTMDLVAEGIDMAVRVSNSLDPVLIARPLGVCGFVLCAAPAYLARRGRPAGLGDLVDHNCLTYTYFGRSLWRFTLGGEIVEVPVSGNLSANDSMTLLSATQAGAGISLMPWPAAKAPVARGELEILLPEAEPQSLGIHAVYASREHQSVLMRRFLDFLVDAFARPEVSRGVAQAC*