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SCNpilot_solid_1_scaffold_3

Search features with annotation key words

Displaying items 1-30 of 445 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_3_1
unknown

Not on your lists

comp(260..361)
DNA (102bp) protein (34aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_3_2
Providencia rettgeri, Providencia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

499..1551
DNA (1053bp) protein (351aa)
Tat pathway signal sequence domain protein n=1 Tax=Providencia rettgeri DSM 1131 RepID=D4C234_PRORE rbh
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EFE52655.1}; TaxID=521000 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Providencia.;" sou
membrane protein
SCNpilot_solid_1_scaffold_3_3
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1671..2831
DNA (1161bp) protein (387aa)
Putative transporter n=2 Tax=Serratia marcescens RepID=L7ZQW0_SERMA rbh
Transcriptional regulator {ECO:0000313|EMBL:KJO95924.1}; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae com
nepI; putative transporter
SCNpilot_solid_1_scaffold_3_4
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2940..3989
DNA (1050bp) protein (350aa)
mannitol dehydrogenase (EC:1.1.1.255)
Mannitol dehydrogenase {ECO:0000313|EMBL:EZP55268.1}; EC=1.1.1.255 {ECO:0000313|EMBL:EZP55268.1};; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae;
Mannitol dehydrogenase n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AS11_DELSC
SCNpilot_solid_1_scaffold_3_5
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4061..4810)
DNA (750bp) protein (250aa)
membrane protein n=1 Tax=Pseudomonas sp. 313 RepID=UPI0003034080
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CAP41404.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (s
SCNpilot_solid_1_scaffold_3_6
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4810..6999)
DNA (2190bp) protein (730aa)
Conjugal transfer protein TraG n=3 Tax=Pseudomonas aeruginosa RepID=V4V8K4_PSEAI rbh
Uncharacterized protein {ECO:0000313|EMBL:ABM41498.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain
hypothetical protein
SCNpilot_solid_1_scaffold_3_7
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7004..7510)
DNA (507bp) protein (169aa)
Uncharacterized protein n=4 Tax=Proteobacteria RepID=E3HKR4_ACHXA
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
hypothetical protein
SCNpilot_solid_1_scaffold_3_8
Xanthomonas citri, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7543..8148)
DNA (606bp) protein (202aa)
Lytic transglycosylase n=1 Tax=Pseudomonas aeruginosa NCGM2.S1 RepID=G4LMU4_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:CEH90872.1}; TaxID=434928 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas citri
lytic transglycosylase
SCNpilot_solid_1_scaffold_3_9
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8130..8861)
DNA (732bp) protein (244aa)
UPI0003D61C01 related cluster n=1 Tax=unknown RepID=UPI0003D61C01 rbh
hypothetical protein
Integrating conjugative element protein%2C PFL_4693 family {ECO:0000313|EMBL:CKG95556.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobac
SCNpilot_solid_1_scaffold_3_10
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8874..9527)
DNA (654bp) protein (218aa)
Uncharacterized protein n=2 Tax=Alcaligenes RepID=M5IZ46_9BURK
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
hypothetical protein
SCNpilot_solid_1_scaffold_3_11
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9524..10090)
DNA (567bp) protein (189aa)
Integrating conjugative element protein PilL, PFGI-1 class n=2 Tax=Proteobacteria RepID=U9KYL9_PSEAI
hypothetical protein
Putative secreted protein {ECO:0000313|EMBL:ABM41503.1}; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="A
SCNpilot_solid_1_scaffold_3_12
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10327..11025
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y455_RAMTT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG92520.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouine
SCNpilot_solid_1_scaffold_3_13
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11033..13306)
DNA (2274bp) protein (758aa)
Uncharacterized protein n=9 Tax=Proteobacteria RepID=B7V545_PSEA8 rbh
Superfamily II DNA/RNA helicase, SNF2 family
Superfamily II DNA/RNA helicases, SNF2 family {ECO:0000313|EMBL:CCH04949.1}; TaxID=1167634 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" sour
SCNpilot_solid_1_scaffold_3_14
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13449..13754)
DNA (306bp) protein (102aa)
Uncharacterized protein n=5 Tax=Proteobacteria RepID=A9IAW2_BORPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAP44636.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (str
SCNpilot_solid_1_scaffold_3_15
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13858..14169)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BWHPSA009 RepID=U9N301_PSEAI
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EED37610.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Sten
SCNpilot_solid_1_scaffold_3_16
Ralstonia sp. AU12-08, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14273..15382)
DNA (1110bp) protein (370aa)
Uncharacterized protein n=25 Tax=Proteobacteria RepID=J4J6W5_9BURK rbh
O-methyl transferase family protein
O-methyl transferase {ECO:0000313|EMBL:EPX97056.1}; TaxID=1235457 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. AU12-08.;
SCNpilot_solid_1_scaffold_3_17
Burkholderia xenovorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15471..16127)
DNA (657bp) protein (219aa)
Uncharacterized protein n=4 Tax=Proteobacteria RepID=A9IFW3_BORPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE31749.1}; TaxID=266265 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia xenov
SCNpilot_solid_1_scaffold_3_18
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16248..16589)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T7G5_ACIDE
Uncharacterized protein {ECO:0000313|EMBL:EER59573.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii
hypothetical protein
SCNpilot_solid_1_scaffold_3_19
Pseudomonas sp. 1-7, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16666..17073)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. Ch1-1 RepID=I2IGV8_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KFJ91467.1}; TaxID=633150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 1-
hypothetical protein
SCNpilot_solid_1_scaffold_3_20
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17176..17517)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BL20 RepID=U9HSL5_PSEAI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM23751.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_3_21
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17610..18299)
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BWHPSA028 RepID=U8NKK4_PSEAI rbh
hypothetical protein
Pf11679 family protein {ECO:0000313|EMBL:BAQ39221.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa
SCNpilot_solid_1_scaffold_3_22
Alcaligenes sp. EGD-AK7, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18359..19315)
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa VRFPA08 RepID=V8DTS1_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:ERI33705.1}; TaxID=1386079 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes sp. EGD-
hypothetical protein
SCNpilot_solid_1_scaffold_3_23
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19905..20717)
DNA (813bp) protein (271aa)
GTPase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036F9A1E rbh
Uncharacterized protein {ECO:0000313|EMBL:GAD24659.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
GTPase
SCNpilot_solid_1_scaffold_3_24
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21057..21773)
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003617BE2
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
hypothetical protein
SCNpilot_solid_1_scaffold_3_25
Klebsiella michiganensis, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21851..22537)
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BL23 RepID=U9G0L4_PSEAI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJZ87901.1}; TaxID=1134687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella mic
SCNpilot_solid_1_scaffold_3_26
Pseudomonas syringae, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22724..23116)
DNA (393bp) protein (131aa)
Uncharacterized protein n=18 Tax=Proteobacteria RepID=A9IB63_BORPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG40978.1}; TaxID=1357279 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas syringae.;" sou
SCNpilot_solid_1_scaffold_3_27
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23139..23351)
DNA (213bp) protein (71aa)
Uncharacterized protein n=4 Tax=Proteobacteria RepID=A4G6I9_HERAR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH05056.1}; TaxID=1167634 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylo
SCNpilot_solid_1_scaffold_3_28
Xanthomonas euvesicatoria, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23684..24241)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Xanthomonas campestris pv. vesicatoria (strain 85-10) RepID=Q3BSX8_XANC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ24081.1}; TaxID=316273 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campes
SCNpilot_solid_1_scaffold_3_29
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24623..25465)
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BL08 RepID=U8L9Q3_PSEAI
C-5 cytosine-specific DNA methylase domain protein {ECO:0000313|EMBL:KDD61888.1}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" so
hypothetical protein
SCNpilot_solid_1_scaffold_3_30
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25438..26088)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BL08 RepID=U8L9Q3_PSEAI
DNA methyltransferase {ECO:0000313|EMBL:KGE68005.1}; TaxID=1324332 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluores
DNA methyltransferase
Displaying items 1-30 of 445 in total

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