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SCNpilot_solid_1_scaffold_3

Search features with annotation key words

Displaying items 31-60 of 445 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_3_31
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26612..28624)
DNA (2013bp) protein (671aa)
DNA topoisomerase III (EC:5.99.1.2)
DNA topoisomerase {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608};; TaxID=1437824 species="Bacteria; Proteoba
DNA topoisomerase n=1 Tax=Pseudomonas aeruginosa WC55 RepID=T5KYD4_PSEAI rbh
SCNpilot_solid_1_scaffold_3_32
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28900..29352)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BWHPSA026 RepID=U8N7X2_PSEAI
Single-stranded DNA-binding protein {ECO:0000256|PIRNR:PIRNR002070, ECO:0000313|EMBL:KIL05428.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; P
hypothetical protein
SCNpilot_solid_1_scaffold_3_33
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29421..29948)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BWHPSA026 RepID=U8NBN5_PSEAI rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAP44656.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (str
SCNpilot_solid_1_scaffold_3_34
Pseudomonas knackmussii, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29945..30721)
DNA (777bp) protein (259aa)
Uncharacterized protein n=5 Tax=Proteobacteria RepID=A9IEN0_BORPD rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAD60670.1}; TaxID=65741 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas knackmu
SCNpilot_solid_1_scaffold_3_35
Klebsiella michiganensis, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30900..32129)
DNA (1230bp) protein (410aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BL23 RepID=U9G032_PSEAI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJZ87910.1}; TaxID=1134687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella mic
SCNpilot_solid_1_scaffold_3_36
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32133..32693)
DNA (561bp) protein (187aa)
Uncharacterized protein n=4 Tax=Pseudomonas aeruginosa RepID=U9G0M3_PSEAI
coproporphyrinogen III oxidase
Coproporphyrinogen III oxidase {ECO:0000313|EMBL:KGE67999.1}; TaxID=1324332 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomona
SCNpilot_solid_1_scaffold_3_37
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32709..34352)
DNA (1644bp) protein (548aa)
Integrating conjugative element ParB n=1 Tax=Pseudomonas aeruginosa VRFPA06 RepID=V8GE85_PSEAI rbh
Uncharacterized protein {ECO:0000313|EMBL:EER62025.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii
transcriptional regulators
SCNpilot_solid_1_scaffold_3_38
Klebsiella michiganensis, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34586..35461)
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa X13273 RepID=U8Z6D0_PSEAI
cobyrinic acid a,c-diamide synthase
Cobyrinic acid a,c-diamide synthase {ECO:0000313|EMBL:AJZ87914.1}; TaxID=1134687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Kl
SCNpilot_solid_1_scaffold_3_39
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35503..35715)
DNA (213bp) protein (71aa)
Phage-related protein n=6 Tax=Proteobacteria RepID=Q9PCJ3_XYLFA
hypothetical protein
Transcriptional regulator in PFGI-1-like cluster {ECO:0000313|EMBL:CCH04877.1}; TaxID=1167634 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" s
SCNpilot_solid_1_scaffold_3_40
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35834..36583)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T0K3_ACIDE
Uncharacterized protein {ECO:0000313|EMBL:EER62021.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii
receptor protein-tyrosine kinase
SCNpilot_solid_1_scaffold_3_41
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37329..38609)
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WUC3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM03065.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter t
hypothetical protein
SCNpilot_solid_1_scaffold_3_42
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38853..39878
DNA (1026bp) protein (342aa)
Bacterial regulatory helix-turn-helix s, AraC family protein n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J2IPB8_9ENTR
AraC family transcriptional regulator {ECO:0000313|EMBL:KDE37003.1}; TaxID=1455607 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="K
AraC family transcriptional regulator
SCNpilot_solid_1_scaffold_3_43
Halomonas boliviensis, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39978..42149
DNA (2172bp) protein (724aa)
ferrioxamine B receptor n=1 Tax=Halomonas sp. KM-1 RepID=UPI0002893A0E rbh
Ferrioxamine B receptor {ECO:0000313|EMBL:EHJ94419.1}; TaxID=1072583 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas boliviens
TonB-dependent siderophore receptor
SCNpilot_solid_1_scaffold_3_44
Halomonas huangheensis, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42149..42892
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Halomonas jeotgali RepID=UPI00034DA612
Uncharacterized protein {ECO:0000313|EMBL:ERL51927.1}; TaxID=1178482 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas huangheen
hypothetical protein
SCNpilot_solid_1_scaffold_3_45
Halomonas salina, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42879..43646
DNA (768bp) protein (256aa)
iron-hydroxamate transporter ATP-binding protein n=1 Tax=Halomonas smyrnensis RepID=UPI0003160662 rbh
Iron-hydroxamate transporter ATP-binding subunit {ECO:0000313|EMBL:KGE79287.1}; TaxID=42565 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" sour
ABC transporter ATP-binding protein
SCNpilot_solid_1_scaffold_3_46
Halomonas sp. PBN3, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43648..44490
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Halomonas sp. PBN3 RepID=U7P265_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ERS89678.1}; TaxID=1397528 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. PBN3.
ABC transporter periplasmic protein
SCNpilot_solid_1_scaffold_3_47
Halomonas sp. KO116, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44487..46469
DNA (1983bp) protein (661aa)
Iron(3+)-hydroxamate import system permease protein FhuB n=1 Tax=Halomonas sp. A3H3 RepID=T2LAD9_9GAMM rbh
ABC-type transporter, integral membrane subunit
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AJY51857.1}; TaxID=1504981 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" sou
SCNpilot_solid_1_scaffold_3_48
blood disease bacterium R229, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46609..47409
DNA (801bp) protein (267aa)
mtnN; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase (EC:3.2.2.9)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000256|SAAS:SAAS00035261}; EC=3.2.2.9 {ECO:0000256|SAAS:SAAS00035196};; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1 {E
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase n=2 Tax=Ralstonia RepID=D8NUI4_RALSL rbh
SCNpilot_solid_1_scaffold_3_49
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47379..48497)
DNA (1119bp) protein (373aa)
NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=Comamonas testosteroni (strain CNB-2) RepID=D0J1G2_COMT2 rbh
NADH:flavin oxidoreductase/NADH oxidase
NADH:flavin oxidoreductase/NADH oxidase {ECO:0000313|EMBL:ACY33851.1}; TaxID=688245 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamon
SCNpilot_solid_1_scaffold_3_50
unknown

Not on your lists

comp(48490..48690)
DNA (201bp) protein (67aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_3_51
Bordetella parapertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48721..48972
DNA (252bp) protein (84aa)
Probable LysR-family transcriptional regulator n=1 Tax=Bordetella parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253) RepID=Q7W6D8_BORPA
LysR family transcriptional regulator
Probable LysR-family transcriptional regulator {ECO:0000313|EMBL:CAE38268.1}; TaxID=257311 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source=
SCNpilot_solid_1_scaffold_3_52
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49031..49648
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GP03_PUSST rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEC20482.1}; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusillimonas sp. (s
SCNpilot_solid_1_scaffold_3_53
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49664..50929)
DNA (1266bp) protein (422aa)
FAD dependent oxidoreductase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GSX9_PUSST rbh
FAD dependent oxidoreductase
FAD dependent oxidoreductase {ECO:0000313|EMBL:AEC20902.1}; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusillimonas s
SCNpilot_solid_1_scaffold_3_54
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51107..51997
DNA (891bp) protein (297aa)
LysR family transcriptional regulator n=1 Tax=Pseudomonas putida LF54 RepID=U2UDL2_PSEPU
LysR family transcriptional regulator {ECO:0000313|EMBL:ERK98435.1}; TaxID=1299319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pse
LysR family transcriptional regulator
SCNpilot_solid_1_scaffold_3_55
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52096..52932)
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Burkholderia ubonensis RepID=UPI00016A5E28 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:KHS00560.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
SCNpilot_solid_1_scaffold_3_56
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53134..53976)
DNA (843bp) protein (281aa)
Phenazine biosynthesis protein, PhzF family n=1 Tax=Pseudomonas syringae pv. morsprunorum str. M302280 RepID=F3DWI1_9PSED rbh
Phenazine biosynthesis protein PhzF rbh
Phenazine biosynthesis protein PhzF {ECO:0000313|EMBL:CDM23674.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Caste
SCNpilot_solid_1_scaffold_3_57
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54093..54764
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GWR3_PUSST rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEC20117.1}; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusillimonas sp. (s
SCNpilot_solid_1_scaffold_3_58
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54761..55471
DNA (711bp) protein (237aa)
7-cyano-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00195886}; EC=6.3.4.20 {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00029421};; 7-cyano-7-carbaguanine
7-cyano-7-deazaguanine synthase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TTA4_ALIDB
Queuosine Biosynthesis QueC ATPase rbh
SCNpilot_solid_1_scaffold_3_59
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55686..55907
DNA (222bp) protein (74aa)
Lipoprotein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GSY1_PUSST
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM23700.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_3_60
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55988..56737)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Burkholderia terrae BS001 RepID=I5CPQ5_9BURK rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CDM25226.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
Displaying items 31-60 of 445 in total

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