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SCNpilot_solid_1_scaffold_3

Search features with annotation key words

Displaying items 421-445 of 445 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_3_417
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

449495..449962
DNA (468bp) protein (156aa)
Uncharacterized protein n=2 Tax=Bordetella holmesii RepID=M5P2D9_9BORD
Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives
Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives {ECO:0000313|EMBL:CDM25772.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcali
SCNpilot_solid_1_scaffold_3_418
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(449971..450894)
DNA (924bp) protein (308aa)
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (EC:3.5.1.108) rbh
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase {ECO:0000256|HAMAP-Rule:MF_00388, ECO:0000256|SAAS:SAAS00041388}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_00388, ECO:0000256|SAAS:SAAS0004138
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GTU9_PUSST rbh
SCNpilot_solid_1_scaffold_3_419
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(451134..452309)
DNA (1176bp) protein (392aa)
peptidase M23 n=1 Tax=Pusillimonas noertemannii RepID=UPI00030BBE18 rbh
Cell division protein FtsZ rbh
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Caste
SCNpilot_solid_1_scaffold_3_420
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(452383..453609)
DNA (1227bp) protein (409aa)
Cell division protein ftsA n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GTU7_PUSST rbh
Cell division protein FtsA rbh
Cell division protein ftsA {ECO:0000256|PIRNR:PIRNR003101}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniel
SCNpilot_solid_1_scaffold_3_421
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(453606..454409)
DNA (804bp) protein (268aa)
Cell division protein FtsQ n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GTU6_PUSST rbh
Cell division protein FtsQ rbh
Cell division protein FtsQ {ECO:0000256|HAMAP-Rule:MF_00911, ECO:0000256|SAAS:SAAS00006985}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Caste
SCNpilot_solid_1_scaffold_3_422
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(454420..455367)
DNA (948bp) protein (316aa)
D-alanine--D-alanine ligase (EC:6.3.2.4) rbh
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000
UPI0003D606F8 related cluster n=1 Tax=unknown RepID=UPI0003D606F8 rbh
SCNpilot_solid_1_scaffold_3_423
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(455364..456770)
DNA (1407bp) protein (469aa)
UDP-N-acetylmuramate--alanine ligase (EC:6.3.2.8) rbh
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuram
UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GTU4_PUSST rbh
SCNpilot_solid_1_scaffold_3_424
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(456767..457840)
DNA (1074bp) protein (358aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC:2.4.1.227) rbh
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GTU3_PUSST rbh
SCNpilot_solid_1_scaffold_3_425
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(457837..459030)
DNA (1194bp) protein (398aa)
Lipid II flippase FtsW n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GTU2_PUSST rbh
Cell division protein FtsW rbh
Putative lipid II flippase FtsW {ECO:0000256|HAMAP-Rule:MF_00913}; Cell division protein FtsW {ECO:0000256|HAMAP-Rule:MF_00913}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Bu
SCNpilot_solid_1_scaffold_3_426
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(459027..460553)
DNA (1527bp) protein (509aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC:6.3.2.9) rbh
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutam
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GTU1_PUSST rbh
SCNpilot_solid_1_scaffold_3_427
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(460550..461722)
DNA (1173bp) protein (391aa)
Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13) rbh
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038, ECO:0000313|EMBL:CDM25783.1}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038, ECO:0000313|EMBL:CDM25783.1};; UDP-MurNA
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=2 Tax=Alcaligenes RepID=M5J3K3_9BURK rbh
SCNpilot_solid_1_scaffold_3_428
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(461712..464498)
DNA (2787bp) protein (929aa)
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC:6.3.2.10) rbh
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136, ECO:0000313|EMBL:CDM25784.1};; TaxID=1437824 species="Bacteria;
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Alcaligenes faecalis subsp. faecalis NCIB 8687 RepID=J0UKY4_ALCFA rbh
SCNpilot_solid_1_scaffold_3_429
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(464495..466231)
DNA (1737bp) protein (579aa)
Cell division protein FtsI [Peptidoglycan synthetase] (EC:2.4.1.129) rbh
Cell division protein FtsI [Peptidoglycan synthetase] {ECO:0000313|EMBL:CDM25785.1}; EC=2.4.1.129 {ECO:0000313|EMBL:CDM25785.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; B
Peptidoglycan glycosyltransferase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GTT8_PUSST rbh
SCNpilot_solid_1_scaffold_3_430
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(466228..466524)
DNA (297bp) protein (99aa)
Cell division protein FtsL n=1 Tax=Alcaligenes faecalis subsp. faecalis NCIB 8687 RepID=J0UM97_ALCFA
Cell division protein FtsL
Cell division protein FtsL {ECO:0000256|HAMAP-Rule:MF_00910, ECO:0000313|EMBL:CDM25786.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castell
SCNpilot_solid_1_scaffold_3_431
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(466521..467570)
DNA (1050bp) protein (350aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_0100
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0F3H4_9BURK rbh
rRNA small subunit methyltransferase H rbh
SCNpilot_solid_1_scaffold_3_432
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(467580..468029)
DNA (450bp) protein (150aa)
Protein MraZ n=33 Tax=Bordetella RepID=K0N265_BORBM
Cell division protein MraZ
Transcriptional regulator MraZ {ECO:0000256|HAMAP-Rule:MF_01008, ECO:0000256|SAAS:SAAS00217766}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; C
SCNpilot_solid_1_scaffold_3_433
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

468403..469752
DNA (1350bp) protein (450aa)
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI00036C29F2 rbh
hydrophobic amino acid ABC transporter , amino acid-binding protein rbh
Hydrophobic amino acid ABC transporter , amino acid-binding protein {ECO:0000313|EMBL:CDM25789.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae;
SCNpilot_solid_1_scaffold_3_434
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(469876..471081)
DNA (1206bp) protein (402aa)
Uncharacterized protein n=1 Tax=Halomonas anticariensis FP35 = DSM 16096 RepID=S2KLN4_9GAMM rbh
Branched-chain amino acid transport system permease protein LivM rbh
Branched-chain amino acid transport system permease protein LivM {ECO:0000313|EMBL:CDM25790.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Ca
SCNpilot_solid_1_scaffold_3_435
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(471094..472167)
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Halomonas anticariensis FP35 = DSM 16096 RepID=S2LE64_9GAMM rbh
High-affinity branched-chain amino acid transport system permease protein LivH rbh
High-affinity branched-chain amino acid transport system permease protein LivH {ECO:0000313|EMBL:CDM25791.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alca
SCNpilot_solid_1_scaffold_3_436
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(472172..472879)
DNA (708bp) protein (236aa)
branched-chain amino acid ABC transporter ATP-binding protein n=1 Tax=Halomonas anticariensis RepID=UPI0003990005 rbh
Branched-chain amino acid transport ATP-binding protein LivF rbh
Branched-chain amino acid transport ATP-binding protein LivF {ECO:0000313|EMBL:CDM25792.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castel
SCNpilot_solid_1_scaffold_3_437
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(472860..473690)
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI00035FB176
Branched-chain amino acid transport ATP-binding protein LivG rbh
Branched-chain amino acid transport ATP-binding protein LivG {ECO:0000313|EMBL:CDM25793.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castel
SCNpilot_solid_1_scaffold_3_438
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

474409..476253
DNA (1845bp) protein (615aa)
ABC transporter ATP-binding protein n=2 Tax=Alcaligenes RepID=M5J3K4_9BURK rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CDM25795.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_3_439
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(476359..477495)
DNA (1137bp) protein (379aa)
Dihydroorotase (EC:3.5.2.3) rbh
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00219, ECO:0000256|RuleBase:RU003440}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00219};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00219, ECO:0000256|RuleBase:RU00
Dihydroorotase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GTT3_PUSST rbh
SCNpilot_solid_1_scaffold_3_440
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

477600..477872
DNA (273bp) protein (91aa)
DNA topoisomerase III (EC:5.99.1.2)
DNA topoisomerase III {ECO:0000313|EMBL:CDM25797.1}; EC=5.99.1.2 {ECO:0000313|EMBL:CDM25797.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; C
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GTT1_PUSST
SCNpilot_solid_1_scaffold_3_441
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(477977..478345)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GTT0_PUSST
Probable transmembrane protein
Probable transmembrane protein {ECO:0000313|EMBL:CDM25798.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellani
Displaying items 421-445 of 445 in total

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