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SCNpilot_solid_1_scaffold_3

Search features with annotation key words

Displaying items 301-330 of 445 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_3_299
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(317451..318866)
DNA (1416bp) protein (472aa)
Signal recognition particle protein n=1 Tax=Achromobacter xylosoxidans C54 RepID=E5U527_ALCXX rbh
Signal recognition particle, subunit Ffh SRP54 rbh
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkho
SCNpilot_solid_1_scaffold_3_300
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

318960..319811
DNA (852bp) protein (284aa)
Cytochrome C assembly family protein n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HIC5_ACHXA
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CDM25651.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_3_301
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

319804..320052
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Achromobacter piechaudii HLE RepID=J4QY61_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM25652.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_3_302
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

320049..320645
DNA (597bp) protein (199aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28) rbh
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:CDM25653.1}; EC=3.5.1.28 {ECO:0000313|EMBL:CDM25653.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alca
N-acetyl-anhydromuranmyl-L-alanine amidase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GR21_PUSST
SCNpilot_solid_1_scaffold_3_303
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

320648..321070
DNA (423bp) protein (141aa)
gloA1; lactoylglutathione lyase GloA (EC:4.4.1.5); K07032 Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
glyoxalase n=1 Tax=Pusillimonas noertemannii RepID=UPI0002DD831B
hypothetical protein
SCNpilot_solid_1_scaffold_3_304
Enterococcus gallinarum, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

321295..322524
DNA (1230bp) protein (410aa)
Uncharacterized protein n=1 Tax=Enterococcus gallinarum EGD-AAK12 RepID=U1DBA7_ENTGA rbh
Uncharacterized protein {ECO:0000313|EMBL:ERE51232.1}; TaxID=1357296 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus gallinarum EGD-AAK12
hypothetical protein
SCNpilot_solid_1_scaffold_3_305
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(322627..323004)
DNA (378bp) protein (126aa)
Transposase, IS30 family n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QKI9_AZOSU
transposase, IS30 family
Transposase, IS30 family {ECO:0000313|EMBL:AEV27728.1}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain A
SCNpilot_solid_1_scaffold_3_306
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

323495..324388
DNA (894bp) protein (298aa)
Uncharacterized protein conserved in bacteria, putative lipoprotein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QII0_AZOSU rbh
hypothetical protein
Uncharacterized protein conserved in bacteria, putative lipoprotein {ECO:0000313|EMBL:AEV26392.1}; Flags: Precursor;; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales;
SCNpilot_solid_1_scaffold_3_307
unknown

Not on your lists

324410..324553
DNA (144bp) protein (48aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_3_308
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

324712..325536
DNA (825bp) protein (275aa)
Probable carboxyvinyl-carboxyphosphonate phosphorylmutase (EC:2.7.8.23) rbh
Probable carboxyvinyl-carboxyphosphonate phosphorylmutase {ECO:0000313|EMBL:CDM25657.1}; EC=2.7.8.23 {ECO:0000313|EMBL:CDM25657.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria
hypothetical protein n=1 Tax=Burkholderia kururiensis RepID=UPI00035F82EB rbh
SCNpilot_solid_1_scaffold_3_309
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(325622..326497)
DNA (876bp) protein (292aa)
S-formylglutathione hydrolase (EC:3.1.2.12) rbh
S-formylglutathione hydrolase {ECO:0000313|EMBL:CDM25660.1}; EC=3.1.2.12 {ECO:0000313|EMBL:CDM25660.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligen
Carboxylesterase n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WQ21_VEREI rbh
SCNpilot_solid_1_scaffold_3_310
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(326569..327678)
DNA (1110bp) protein (370aa)
S-(hydroxymethyl)glutathione dehydrogenase (EC:1.1.1.284) rbh
S-(hydroxymethyl)glutathione dehydrogenase {ECO:0000256|RuleBase:RU362016}; EC=1.1.1.284 {ECO:0000256|RuleBase:RU362016, ECO:0000313|EMBL:CDM25661.1};; TaxID=1437824 species="Bacteria; Proteobacteria;
S-(hydroxymethyl)glutathione dehydrogenase n=1 Tax=Pusillimonas noertemannii RepID=UPI0002F1EB65 rbh
SCNpilot_solid_1_scaffold_3_311

Not on your lists

comp(327810..328805)
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Halomonas elongata (strain ATCC 33173 / DSM 2581 / NBRC 15536 / NCIMB 2198 / 1H9) RepID=E1V486_HALED rbh
Uncharacterized protein {ECO:0000313|EMBL:KKO07337.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
SCNpilot_solid_1_scaffold_3_312
Marinobacterium sp. AK27, Marinobacterium, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(328846..330018)
DNA (1173bp) protein (391aa)
Mandelate racemase {ECO:0000313|EMBL:KEA63955.1}; EC=5.1.2.2 {ECO:0000313|EMBL:KEA63955.1};; TaxID=1232683 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Ma
2-dehydro-3-deoxyphosphogalactonate aldolase n=1 Tax=Vibrio nigripulchritudo ATCC 27043 RepID=F9TIH4_9VIBR rbh
putative Mandelate racemase/muconate lactonizing enzyme/Galactonate dehydratase
SCNpilot_solid_1_scaffold_3_313
Marinobacterium sp. AK27, Marinobacterium, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(330052..331074)
DNA (1023bp) protein (341aa)
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154}; EC=1.1.1.262 {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154};; 4-(phosph
4-hydroxythreonine-4-phosphate dehydrogenase n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4XFS9_9BURK rbh
4-hydroxythreonine-4-phosphate dehydrogenase
SCNpilot_solid_1_scaffold_3_314
Pseudomonas oryzihabitans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(331102..332619)
DNA (1518bp) protein (506aa)
tricarboxylate transporter n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002F0AC8D rbh
Tricarboxylate transporter {ECO:0000313|EMBL:KIZ49856.1}; TaxID=47885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas oryz
tctA1; tricarboxylate transport protein TctA
SCNpilot_solid_1_scaffold_3_315
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(332630..333160)
DNA (531bp) protein (177aa)
Tripartite tricarboxylate transporter TctB n=1 Tax=Pseudomonas fluorescens NCIMB 11764 RepID=U7DUE2_PSEFL
Tripartite tricarboxylate transporter TctB {ECO:0000313|EMBL:ERP44576.1}; TaxID=1221522 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source
hypothetical protein
SCNpilot_solid_1_scaffold_3_316
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(333243..334256)
DNA (1014bp) protein (338aa)
Tricarboxylate transport protein TctC n=1 Tax=Pseudomonas pseudoalcaligenes KF707 RepID=L8M765_PSEPS rbh
Tricarboxylate transport protein TctC {ECO:0000313|EMBL:ELS24007.1}; TaxID=1149133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas o
hypothetical protein
SCNpilot_solid_1_scaffold_3_317
Burkholderia sp. SJ98, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

334350..335306
DNA (957bp) protein (319aa)
LysR family transcriptional regulator n=1 Tax=Burkholderia sp. SJ98 RepID=K8R9E1_9BURK rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:EKS70204.1}; TaxID=406819 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burk
Galactose-binding protein regulator
SCNpilot_solid_1_scaffold_3_318
Herbaspirillum sp. GW103, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(335356..336546)
DNA (1191bp) protein (397aa)
Acetyl-CoA acetyltransferase n=1 Tax=Herbaspirillum sp. GW103 RepID=I3CY03_9BURK rbh
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:EIJ48496.1}; TaxID=1175306 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspiri
acetyl-CoA acetyltransferase
SCNpilot_solid_1_scaffold_3_319
Burkholderia cenocepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(336558..338696)
DNA (2139bp) protein (713aa)
3-hydroxyacyl-CoA dehydrogenase NAD-binding n=1 Tax=Burkholderia cenocepacia (strain MC0-3) RepID=B1JZ83_BURCC rbh
enoyl-CoA hydratase/isomerase family protein
Enoyl-CoA hydratase/isomerase family protein {ECO:0000313|EMBL:AIO41527.1}; TaxID=95486 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkhold
SCNpilot_solid_1_scaffold_3_320
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

338826..339743
DNA (918bp) protein (306aa)
Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6VAI9_VARPE rbh
Variovorax paradoxus strain MEDvA23 contig_26, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ32743.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
LysR family transcriptional regulator
SCNpilot_solid_1_scaffold_3_321
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(339798..341702)
DNA (1905bp) protein (635aa)
Chaperone protein HtpG n=1 Tax=Alcaligenes faecalis subsp. faecalis NCIB 8687 RepID=J0AZ60_ALCFA rbh
Chaperone protein HtpG rbh
Chaperone protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505, ECO:0000256|SAAS:SAAS00218406}; Heat shock protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505}; High temperature protein G {ECO:0000256|HAMAP-Rule:M
SCNpilot_solid_1_scaffold_3_322
BJP_IG2103_Rhodocyclales_63_50, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(341828..343000)
DNA (1173bp) protein (391aa)
Small-conductance mechanosensitive channel n=1 Tax=Limnobacter sp. MED105 RepID=A6GQT0_9BURK
small-conductance mechanosensitive channel
Tax=BJP_IG2103_Rhodocyclales_63_50
SCNpilot_solid_1_scaffold_3_323
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

343220..345229
DNA (2010bp) protein (670aa)
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI00036CE4B7 rbh
Methyl-accepting chemotaxis protein I rbh
Methyl-accepting chemotaxis protein I {ECO:0000313|EMBL:CDM25663.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Cas
SCNpilot_solid_1_scaffold_3_324
Pseudomonas sp. Lz4W, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

345289..346320
DNA (1032bp) protein (344aa)
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI0003764C0A rbh
Putative iron-binding periplasmic protein {ECO:0000313|EMBL:EMI08569.1}; TaxID=1206777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source=
iron ABC transporter substrate-binding protein
SCNpilot_solid_1_scaffold_3_325
Pseudomonas chlororaphis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

346356..347867
DNA (1512bp) protein (504aa)
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI000363211E rbh
Iron ABC transporter, permease protein {ECO:0000313|EMBL:EJL00887.1}; TaxID=1038921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Ps
iron ABC transporter permease
SCNpilot_solid_1_scaffold_3_326

Not on your lists

347857..348903
DNA (1047bp) protein (349aa)
fbpC; Fe(3+) ions import ATP-binding protein FbpC 1 (EC:3.6.3.30)
ABC transporter n=1 Tax=Methylopila sp. M107 RepID=UPI00035E404B
Uncharacterized protein {ECO:0000313|EMBL:KKN13534.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SCNpilot_solid_1_scaffold_3_327
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(348913..351678)
DNA (2766bp) protein (922aa)
Mg(2+) transport ATPase, P-type (EC:3.6.3.2) rbh
Mg(2+) transport ATPase, P-type {ECO:0000313|EMBL:CDM25677.1}; EC=3.6.3.2 {ECO:0000313|EMBL:CDM25677.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcalige
magnesium-transporting ATPase n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI0002377B60
SCNpilot_solid_1_scaffold_3_328
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

352020..353618
DNA (1599bp) protein (533aa)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI00035F950B rbh
Methyl-accepting chemotaxis protein I rbh
Methyl-accepting chemotaxis protein I {ECO:0000313|EMBL:CDM24565.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Cas
Displaying items 301-330 of 445 in total

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