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SCNpilot_solid_1_scaffold_3_417

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 449495..449962

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=2 Tax=Bordetella holmesii RepID=M5P2D9_9BORD similarity UNIREF
DB: UNIREF100
  • Identity: 45.7
  • Coverage: 162.0
  • Bit_score: 134
  • Evalue 1.10e-28
Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives similarity KEGG
DB: KEGG
  • Identity: 68.4
  • Coverage: 155.0
  • Bit_score: 205
  • Evalue 8.70e-51
Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives {ECO:0000313|EMBL:CDM25772.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcali similarity UNIPROT
DB: UniProtKB
  • Identity: 68.4
  • Coverage: 155.0
  • Bit_score: 205
  • Evalue 4.30e-50

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 468
ATGTCATCGGCCTCGCACCACCGCAGCCGCTCGTCCGGGATACCGGCCCTGAACTGGCTGAGCCACCACCCCCAGGGTTCGCGCCTGCTGCGCACGGCGCACGAACTGCTGGCCCTGCAGGCGGCGCTGGCCCGCATTCTGCCGCCCGCGCTGGGCCGCCGCATCCGGGTGGCCCGTATGGATGGACACCAGATCACGATCATGGTTCCCGGCCCGGCGCACGCCGCCCGCCTGCGCCAGCTGACCGACGACGCCGCCCGCAAGCTGAGGGAAGCCGGCTGGCCGGTCGATACGATTGTCGTGCGGATCGACGCCGCCCCGGGCCTTGACGAGACACGAAAGCCCCTCAGGGAAACCCAGCCCCTGAATGAACAGGCCTTGCAGTCGTTCGAGGACCTGCGGCAGCAGCTGGCCCCCAGCCCTTTGGCCGACGCCATTGCAAAACTGCTGCGGCATCACCGCCGCTGA
PROTEIN sequence
Length: 156
MSSASHHRSRSSGIPALNWLSHHPQGSRLLRTAHELLALQAALARILPPALGRRIRVARMDGHQITIMVPGPAHAARLRQLTDDAARKLREAGWPVDTIVVRIDAAPGLDETRKPLRETQPLNEQALQSFEDLRQQLAPSPLADAIAKLLRHHRR*