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SCNpilot_solid_1_scaffold_3

Search features with annotation key words

Displaying items 391-420 of 445 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_3_388
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

414717..415766
DNA (1050bp) protein (350aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002D2CCE3 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CDM25751.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_3_389
Achromobacter sp. RTa, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

415766..416467
DNA (702bp) protein (234aa)
Putative nucleotidyl transferase n=1 Tax=Bordetella parapertussis (strain Bpp5) RepID=K0MC13_BORPB rbh
Mannose-1-phosphate guanylyltransferase {ECO:0000313|EMBL:KGD98992.1}; TaxID=1532557 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Ac
nucleotidyl transferase
SCNpilot_solid_1_scaffold_3_390
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

416684..417406
DNA (723bp) protein (241aa)
Inner membrane protein n=1 Tax=Alcaligenes faecalis subsp. faecalis NCIB 8687 RepID=J0UM68_ALCFA
putative inner membrane protein rbh
Putative inner membrane protein {ECO:0000313|EMBL:CDM25753.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellan
SCNpilot_solid_1_scaffold_3_391
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(417473..418201)
DNA (729bp) protein (243aa)
Glutamine ABC transporter ATP-binding protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GTW7_PUSST rbh
Glutamate transport ATP-binding protein rbh
Glutamate transport ATP-binding protein {ECO:0000313|EMBL:CDM25754.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="C
SCNpilot_solid_1_scaffold_3_392
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(418198..419037)
DNA (840bp) protein (280aa)
Amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GTW6_PUSST rbh
Glutamate transport membrane-spanning protein rbh
Glutamate transport membrane-spanning protein {ECO:0000313|EMBL:CDM25755.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" sou
SCNpilot_solid_1_scaffold_3_393
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(419056..419802)
DNA (747bp) protein (249aa)
Glutamine ABC transporter periplasmic protein n=1 Tax=Alcaligenes faecalis subsp. faecalis NCIB 8687 RepID=J0UKV8_ALCFA rbh
Glutamine ABC transporter, periplasmic glutamine-binding protein rbh
Glutamine ABC transporter, periplasmic glutamine-binding protein {ECO:0000313|EMBL:CDM25756.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Ca
SCNpilot_solid_1_scaffold_3_394
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(419979..420764)
DNA (786bp) protein (262aa)
Exported protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GTW3_PUSST rbh
Methionine ABC transporter substrate-binding protein rbh
Methionine ABC transporter substrate-binding protein {ECO:0000313|EMBL:CDM25757.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella
SCNpilot_solid_1_scaffold_3_395
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(420852..421508)
DNA (657bp) protein (219aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GTW2_PUSST rbh
Methionine ABC transporter permease protein rbh
Methionine ABC transporter permease protein {ECO:0000313|EMBL:CDM25758.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" sourc
SCNpilot_solid_1_scaffold_3_396
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(421505..422518)
DNA (1014bp) protein (338aa)
Methionine import ATP-binding protein MetN {ECO:0000256|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01719};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkho
Amino-acid ABC transporter ATP-binding protein y4tH n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GTW1_PUSST rbh
Methionine ABC transporter ATP-binding protein rbh
SCNpilot_solid_1_scaffold_3_397
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(422664..424388)
DNA (1725bp) protein (575aa)
Diguanylate cyclase n=1 Tax=Comamonas testosteroni ATCC 11996 RepID=H1RK09_COMTE rbh
Diguanylate cyclase {ECO:0000313|EMBL:KGH06353.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudo
diguanylate cyclase
SCNpilot_solid_1_scaffold_3_398
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

424595..427570
DNA (2976bp) protein (992aa)
Response regulator receiver n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6YU55_9RHOO rbh
diguanylate cyclase/phosphodiesterase rbh
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:CDM22963.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Cas
SCNpilot_solid_1_scaffold_3_399
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

427567..428586
DNA (1020bp) protein (340aa)
Response regulator n=3 Tax=Azotobacter vinelandii RepID=C1DIL9_AZOVD rbh
Response regulator rbh
Response regulator {ECO:0000313|EMBL:CDM22964.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragr
SCNpilot_solid_1_scaffold_3_400
Pseudomonas sp. 12M76_air, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(428624..429937)
DNA (1314bp) protein (438aa)
arylsulfatase n=1 Tax=Halomonas zhanjiangensis RepID=UPI000377D40E
Arsenical pump membrane protein {ECO:0000313|EMBL:CEA04413.1}; TaxID=1461581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomon
arylsulfatase
SCNpilot_solid_1_scaffold_3_401
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

430037..430711
DNA (675bp) protein (225aa)
Cupin 2 conserved barrel domain protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TUM1_ALIDB
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CDM24992.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_3_402
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

430830..431789
DNA (960bp) protein (320aa)
membrane protein n=1 Tax=Acidovorax avenae RepID=UPI0002F27E48
Permease of the drug/metabolite transporter superfamily
Permease of the drug/metabolite transporter superfamily {ECO:0000313|EMBL:CDM24993.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellanie
SCNpilot_solid_1_scaffold_3_403
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(431835..432320)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UHP6_RHIRD
Uncharacterized protein {ECO:0000313|EMBL:KDP75718.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="E
hypothetical protein
SCNpilot_solid_1_scaffold_3_404
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(432445..433080)
DNA (636bp) protein (212aa)
Transcriptional regulator, Fis family n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B137_PARDP
Fis family transcriptional regulator
LuxR family transcriptional regulator {ECO:0000313|EMBL:KFL27259.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp
SCNpilot_solid_1_scaffold_3_405
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(433052..434611)
DNA (1560bp) protein (520aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhiz
Histidine kinase n=1 Tax=Alcaligenes faecalis subsp. faecalis NCIB 8687 RepID=J0ULX5_ALCFA
histidine kinase
SCNpilot_solid_1_scaffold_3_406
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

434853..435191
DNA (339bp) protein (113aa)
Uncharacterized protein n=2 Tax=Labrenzia RepID=U7GCS7_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KFL37915.1}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghae
hypothetical protein
SCNpilot_solid_1_scaffold_3_407
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

435196..435603
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6X8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KFL37916.1}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghae
hypothetical protein
SCNpilot_solid_1_scaffold_3_trna_2
unknown

Not on your lists

comp(435919..435991)
DNA (73bp)
transferRNA
SCNpilot_solid_1_scaffold_3_408
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

436058..436855
DNA (798bp) protein (266aa)
Metallophosphoesterase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPE3_9GAMM
Ser/Thr protein phosphatase family protein rbh
Ser/Thr protein phosphatase family protein {ECO:0000313|EMBL:CDM25761.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source
SCNpilot_solid_1_scaffold_3_409
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(436841..439030)
DNA (2190bp) protein (730aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI00031DC069 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CDM25762.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_3_410
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(439193..441058)
DNA (1866bp) protein (622aa)
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61) rbh
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0003108F27 rbh
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC {ECO:0000256|HAMAP-Rule:MF_01102, ECO:0000256|SAAS:SAAS00084295}; Short=tRNA mnm(5)s(2)U biosynthesis bifunctional protein
SCNpilot_solid_1_scaffold_3_411
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

441076..441990
DNA (915bp) protein (305aa)
Inositol-1-monophosphatase (EC:3.1.3.25) rbh
Inositol-1-monophosphatase {ECO:0000313|EMBL:CDM25764.1}; EC=3.1.3.25 {ECO:0000313|EMBL:CDM25764.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenace
Inositol monophosphatase-family protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I522_BORPD rbh
SCNpilot_solid_1_scaffold_3_412
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

441987..443186
DNA (1200bp) protein (400aa)
N-acyl-L-amino acid amidohydrolase (EC:3.5.1.14) rbh
N-acyl-L-amino acid amidohydrolase {ECO:0000313|EMBL:CDM25765.1}; EC=3.5.1.14 {ECO:0000313|EMBL:CDM25765.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alca
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0003053BB4 rbh
SCNpilot_solid_1_scaffold_3_413
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

443325..443717
DNA (393bp) protein (131aa)
Acyl-CoA hydrolase (EC:3.1.2.20)
Acyl-CoA hydrolase {ECO:0000313|EMBL:CDM25766.1}; EC=3.1.2.20 {ECO:0000313|EMBL:CDM25766.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Cast
Acyl-CoA hydrolase n=2 Tax=Alcaligenes xylosoxydans xylosoxydans RepID=R4XL96_ALCXX
SCNpilot_solid_1_scaffold_3_414
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

443725..445209
DNA (1485bp) protein (495aa)
Putative cation transport protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GTV3_PUSST rbh
Mg/Co/Ni transporter MgtE rbh
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniel
SCNpilot_solid_1_scaffold_3_415
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(445605..448352)
DNA (2748bp) protein (916aa)
Protein translocase subunit SecA n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GTV2_PUSST rbh
Protein export cytoplasm protein SecA ATPase RNA helicase rbh
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae;
SCNpilot_solid_1_scaffold_3_416
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(448455..449480)
DNA (1026bp) protein (342aa)
Metallopeptidase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GTV1_PUSST
peptidase M23B rbh
Peptidase M23B {ECO:0000313|EMBL:CDM25771.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans
Displaying items 391-420 of 445 in total

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