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SCNpilot_solid_1_scaffold_3_54

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 51107..51997

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Pseudomonas putida LF54 RepID=U2UDL2_PSEPU similarity UNIREF
DB: UNIREF100
  • Identity: 68.6
  • Coverage: 290.0
  • Bit_score: 400
  • Evalue 1.30e-108
LysR family transcriptional regulator {ECO:0000313|EMBL:ERK98435.1}; TaxID=1299319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pse similarity UNIPROT
DB: UniProtKB
  • Identity: 68.6
  • Coverage: 290.0
  • Bit_score: 400
  • Evalue 1.80e-108
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 69.2
  • Coverage: 289.0
  • Bit_score: 399
  • Evalue 6.00e-109

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Taxonomy

Pseudomonas putida → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 891
ATGGAAGCCCACATGACACCGAATCGGCCGCTCTTCGACCTGGACCTGCTGAAAGCCCTCGTCACGGTCGTGGACTGCGGCGGCTTCACGGCCGCGGCCGCGCGGCTCCACTCCACCCAATCCACGATCAGCCAGAAAATTCGCCGCCTCGAAGACATGGCCGGCCACCGGCTGCTGGACCGGGGCAACCGCGAGGTCCTGCCGACCGAAGCCGGCCAGGCGCTGCTGAGCCATGCCCGCCATCTGCTGGCCCTGAACGACCAGCTCCTGGACGTGCTGGCCGGCGCGGCCGTCGCCACCACCGTGCGGCTGGGCGTGCCCGAGGACTTCGTCGCCAGCCGCACGACGCAGGTGCTGGCGGCCTTCAGCCGGGACCATCCCCAGGTCAAGCTGGAGATCACCAGCGGACTCTGCGCCGGCCTGACCGCCAGCTTCGATCGCGGGGAACTGGACCTGATCCTGACCAAGCAGCGCCGCCACAGCCGCGCTGCCGTCGCCTGCCAGGCCGAATCCCTGGCCTGGATCGACAGCGCGACACACCCCTGCCTGCACCTCGACCCGGTGCCCCTGGTGACGTTTCCGCCTCGCGGCCTGTACCGGGACGACATCATCCGCGGCATCGAGGCCATGGGCCGCAACTGGCGCATCGCCTACACCTGTTCCAGCCTGAACGGCATCCAGAGCGCCGTGGCCGCCGGCCTGGGCATCAGCCTGCTGCCGCGGCGCACCGTCACCGCCGATCACGCCGTCCTCGGCGCCAGGGACGGCCTGCCGCCCGTCGACGGATACGAAATCGGGCTGTTCCACCGGCCCACGGCCAACGCCACGGTCCTGGCCCTTGCGCAGGCCCTGGCCGGCATGCTCGCCGGCGAGACCCCGCTGCTGCCCTGA
PROTEIN sequence
Length: 297
MEAHMTPNRPLFDLDLLKALVTVVDCGGFTAAAARLHSTQSTISQKIRRLEDMAGHRLLDRGNREVLPTEAGQALLSHARHLLALNDQLLDVLAGAAVATTVRLGVPEDFVASRTTQVLAAFSRDHPQVKLEITSGLCAGLTASFDRGELDLILTKQRRHSRAAVACQAESLAWIDSATHPCLHLDPVPLVTFPPRGLYRDDIIRGIEAMGRNWRIAYTCSSLNGIQSAVAAGLGISLLPRRTVTADHAVLGARDGLPPVDGYEIGLFHRPTANATVLALAQALAGMLAGETPLLP*