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SCNpilot_solid_1_scaffold_3

Search features with annotation key words

Displaying items 61-90 of 445 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_3_61
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56823..57956)
DNA (1134bp) protein (378aa)
Membrane-attached phosphoesterase n=1 Tax=Pseudomonas sp. Lz4W RepID=M5QWP7_9PSED rbh
putative membrane-attached phosphoesterase rbh
Putative membrane-attached phosphoesterase {ECO:0000313|EMBL:CDM25227.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source
SCNpilot_solid_1_scaffold_3_62
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58162..59487
DNA (1326bp) protein (442aa)
Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region n=1 Tax=Achromobacter xylosoxidans NH44784-1996 RepID=R4XVT0_ALCXX rbh
putative flavocytochrome rbh
Putative flavocytochrome {ECO:0000313|EMBL:CDM25230.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella d
SCNpilot_solid_1_scaffold_3_trna_1
unknown

Not on your lists

59537..59607
DNA (71bp)
transferRNA
SCNpilot_solid_1_scaffold_3_63
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(59746..61605)
DNA (1860bp) protein (620aa)
Chemotaxis sensory transducer n=2 Tax=Alicycliphilus denitrificans RepID=E8TVD8_ALIDB rbh
chemotaxis sensory transducer protein
Chemotaxis sensory transducer {ECO:0000313|EMBL:ADV01783.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphil
SCNpilot_solid_1_scaffold_3_64
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61722..63176)
DNA (1455bp) protein (485aa)
Succinyl-diaminopimelate desuccinylase n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IQU1_BORPD rbh
Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase rbh
Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase {ECO:0000313|EMBL:CDM25307.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae;
SCNpilot_solid_1_scaffold_3_65
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

63312..63992
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI000362B8D9
ABC-type multidrug transport system, ATPase and permease components
ABC-type multidrug transport system, ATPase and permease components {ECO:0000313|EMBL:CDM25309.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae;
SCNpilot_solid_1_scaffold_3_66
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

64041..64628
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002FB57F5
putative NUDIX hydrolase rbh
Putative NUDIX hydrolase {ECO:0000313|EMBL:CDM25315.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella d
SCNpilot_solid_1_scaffold_3_67
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

64651..65466
DNA (816bp) protein (272aa)
Leucyl/phenylalanyl-tRNA--protein transferase (EC:2.3.2.6)
Leucyl/phenylalanyl-tRNA--protein transferase {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000313|EMBL:CDM25316.1}; EC=2.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000313|EMBL:CDM25316.1};; L/F-transferas
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI00030D2173
SCNpilot_solid_1_scaffold_3_68
Bordetella hinzii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(65533..66486)
DNA (954bp) protein (318aa)
4-phosphoerythronate dehydrogenase {ECO:0000313|EMBL:KCB41670.1}; EC=1.1.1.290 {ECO:0000313|EMBL:KCB41670.1};; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alc
D-isomer specific 2-hydroxyacid dehydrogenase n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0FEA5_9BURK rbh
D-isomer specific 2-hydroxyacid dehydrogenase
SCNpilot_solid_1_scaffold_3_69
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

66594..67355
DNA (762bp) protein (254aa)
Arginine-tRNA-protein transferase (EC:2.3.2.8) rbh
Putative arginyl-tRNA--protein transferase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GPK0_PUSST rbh
Putative arginyl-tRNA--protein transferase {ECO:0000256|HAMAP-Rule:MF_00689, ECO:0000256|SAAS:SAAS00194293}; Short=Arginyltransferase {ECO:0000256|HAMAP-Rule:MF_00689};; Short=R-transferase {ECO:00002
SCNpilot_solid_1_scaffold_3_70
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

67379..68419
DNA (1041bp) protein (347aa)
Dihydroorotate dehydrogenase (EC:1.3.98.1) rbh
Dihydroorotate dehydrogenase (quinone) {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00054567}; EC=1.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00084821};; DHOdehase {ECO:00
Dihydroorotate dehydrogenase (quinone) n=1 Tax=Bordetella parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253) RepID=PYRD_BORPA rbh
SCNpilot_solid_1_scaffold_3_71
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

68416..69207
DNA (792bp) protein (264aa)
Bacterial transcriptional regulator family protein 23 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HXB0_ACHXA rbh
D-galactonate regulator, IclR family
D-galactonate regulator, IclR family {ECO:0000313|EMBL:CDM25329.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Cast
SCNpilot_solid_1_scaffold_3_72
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

69530..70549
DNA (1020bp) protein (340aa)
TRAP transporter solute receptor, DctP family protein 7 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HXA8_ACHXA rbh
TRAP transporter solute receptor subunit DctP family protein 7 rbh
TRAP transporter solute receptor, DctP family protein 7 {ECO:0000313|EMBL:ADP17630.1}; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacte
SCNpilot_solid_1_scaffold_3_73
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

70648..71124
DNA (477bp) protein (159aa)
Tripartite ATP-independent periplasmic transporter, DctQ component family protein 10 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HXA7_ACHXA
tripartite ATP-independent periplasmic transporter subunit DctQ family protein 10 Tax=DS1215_Halomonas_54_146
tripartite ATP-independent periplasmic transporter subunit DctQ family protein 10
SCNpilot_solid_1_scaffold_3_74
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

71127..72410
DNA (1284bp) protein (428aa)
TRAP transporter, DctM subunit 9 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HXA6_ACHXA rbh
TRAP transporter subunit DctM rbh
TRAP transporter, DctM subunit 9 {ECO:0000313|EMBL:ADP17628.1}; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobac
SCNpilot_solid_1_scaffold_3_75
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

72460..73374
DNA (915bp) protein (305aa)
Acetaldehyde dehydrogenase (EC:1.2.1.10) rbh
Acetaldehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01657, ECO:0000256|SAAS:SAAS00042164}; EC=1.2.1.10 {ECO:0000256|HAMAP-Rule:MF_01657, ECO:0000256|SAAS:SAAS00042125};; Acetaldehyde dehydrogenase [
Acetaldehyde dehydrogenase n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HXA5_ACHXA rbh
SCNpilot_solid_1_scaffold_3_76
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

73385..74425
DNA (1041bp) protein (347aa)
4-hydroxy-2-oxovalerate aldolase {ECO:0000256|HAMAP-Rule:MF_01656, ECO:0000256|SAAS:SAAS00035546}; Short=HOA {ECO:0000256|HAMAP-Rule:MF_01656};; EC=4.1.3.39 {ECO:0000256|HAMAP-Rule:MF_01656, ECO:00002
4-hydroxy-2-oxovalerate aldolase 2 n=1 Tax=Azoarcus sp. (strain BH72) RepID=HOA2_AZOSB
4-hydroxy-2-oxovalerate aldolase rbh
SCNpilot_solid_1_scaffold_3_77
GWC2_Deltaproteobacteria_65_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

74684..76159
DNA (1476bp) protein (492aa)
Probable ABC transporter substrate-binding protein id=4708084 bin=GWC2_Proteo_65_14_Ab886 species=Nitrococcus mobilis genus=Nitrococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria rbh
sugar ABC transporter periplasmic ligand binding protein; K02027 multiple sugar transport system substrate-binding protein Tax=GWC2_Deltaproteobacteria_65_14_curated
sugar ABC transporter periplasmic ligand binding protein
SCNpilot_solid_1_scaffold_3_78
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

76181..77200
DNA (1020bp) protein (340aa)
ABC transporter n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002EBC00A rbh
ABC transporter; K02023 multiple sugar transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
sn-glycerol-3-phosphate ABC transporter ATP-binding protein
SCNpilot_solid_1_scaffold_3_79
GWC2_Deltaproteobacteria_65_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

77205..78131
DNA (927bp) protein (309aa)
binding-protein-dependent transport system inner membrane protein id=4708086 bin=GWC2_Proteo_65_14_Ab886 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
binding-protein-dependent transport system inner membrane protein; K02025 multiple sugar transport system permease protein Tax=GWC2_Deltaproteobacteria_65_14_curated
ABC transporter permease
SCNpilot_solid_1_scaffold_3_80
GWC2_Deltaproteobacteria_65_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

78134..78979
DNA (846bp) protein (282aa)
ABC transport system permease protein YcjP id=4708087 bin=GWC2_Proteo_65_14_Ab886 species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria rbh
ycjP; ABC transporter permease; K02026 multiple sugar transport system permease protein Tax=GWC2_Deltaproteobacteria_65_14_curated
binding-protein-dependent transport system inner membrane protein
SCNpilot_solid_1_scaffold_3_81
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(79052..82228)
DNA (3177bp) protein (1059aa)
Cation/multidrug efflux pump protein n=1 Tax=Herbaspirillum frisingense GSF30 RepID=R0G8J9_9BURK rbh
Cobalt-zinc-cadmium resistance protein CzcA Cation efflux system protein CusA {ECO:0000313|EMBL:CDM25333.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcal
Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA rbh
SCNpilot_solid_1_scaffold_3_82
Collimonas arenae, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(82242..83465)
DNA (1224bp) protein (408aa)
Multidrug resistance protein MdtA n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S9Y6_9BURK rbh
putative Co/Zn/Cd efflux system membrane fusion protein
Putative Co/Zn/Cd efflux system membrane fusion protein {ECO:0000313|EMBL:AIY42679.1}; TaxID=279058 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas
SCNpilot_solid_1_scaffold_3_83
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(83657..84226)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GPK2_PUSST
granule-associated protein rbh
Granule-associated protein {ECO:0000313|EMBL:CDM25335.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella
SCNpilot_solid_1_scaffold_3_84
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(84416..85246)
DNA (831bp) protein (277aa)
IclR family transcriptional regulator n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GPK5_PUSST rbh
Transcriptional regulator, IclR family rbh
Transcriptional regulator, IclR family {ECO:0000313|EMBL:CDM25336.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Ca
SCNpilot_solid_1_scaffold_3_85
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(85394..86239)
DNA (846bp) protein (282aa)
Damage-inducible protein n=1 Tax=Alcaligenes sp. EGD-AK7 RepID=U1YEG3_9BURK rbh
Molybdopterin-binding protein rbh
Molybdopterin-binding protein {ECO:0000313|EMBL:CDM25337.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellanie
SCNpilot_solid_1_scaffold_3_86
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(86288..87088)
DNA (801bp) protein (267aa)
Putative inner membrane protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GPK7_PUSST rbh
putative inner membrane protein rbh
Putative inner membrane protein {ECO:0000313|EMBL:CDM25338.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellan
SCNpilot_solid_1_scaffold_3_87
Alcaligenes faecalis, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

87141..87518
DNA (378bp) protein (126aa)
Thiol-disulfide isomerase and thioredoxins family protein n=1 Tax=Alcaligenes faecalis subsp. faecalis NCIB 8687 RepID=J0B826_ALCFA
Thiol-disulfide isomerase and thioredoxins family protein {ECO:0000313|EMBL:EJC62205.1}; TaxID=1156918 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligen
hypothetical protein
SCNpilot_solid_1_scaffold_3_88
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(87547..88932)
DNA (1386bp) protein (462aa)
DEAD/DEAH box helicase n=1 Tax=Pusillimonas noertemannii RepID=UPI00031F5D24 rbh
ATP-dependent RNA helicase rbh
ATP-dependent RNA helicase {ECO:0000313|EMBL:CDM25339.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella
SCNpilot_solid_1_scaffold_3_89
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

89058..89978
DNA (921bp) protein (307aa)
Branched-chain amino acid aminotransferase (EC:2.6.1.42) rbh
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:CDM25340.1}; EC=2.6.1.42 {ECO:0000313|EMBL:CDM25340.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderial
branched-chain amino acid aminotransferase n=1 Tax=Pusillimonas noertemannii RepID=UPI0003073295 rbh
Displaying items 61-90 of 445 in total

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