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SCNpilot_solid_1_scaffold_3_88

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(87547..88932)

Top 3 Functional Annotations

Value Algorithm Source
DEAD/DEAH box helicase n=1 Tax=Pusillimonas noertemannii RepID=UPI00031F5D24 similarity UNIREF
DB: UNIREF100
  • Identity: 73.9
  • Coverage: 460.0
  • Bit_score: 647
  • Evalue 9.10e-183
  • rbh
ATP-dependent RNA helicase similarity KEGG
DB: KEGG
  • Identity: 85.8
  • Coverage: 431.0
  • Bit_score: 715
  • Evalue 1.00e-203
  • rbh
ATP-dependent RNA helicase {ECO:0000313|EMBL:CDM25339.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella similarity UNIPROT
DB: UniProtKB
  • Identity: 85.8
  • Coverage: 431.0
  • Bit_score: 715
  • Evalue 5.00e-203

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1386
ATGACCGAATCCACCCCCACCGATCCCATTGCCGAACAACCCGTCGCGTTTGGCCAGTTCGGCCTGCATCCAGGCATCATGCAGGCCATCGAGGCCACGGGCTACACGTCCGCCACGCCGATTCAGGCCAAGGCCATCCCGATCGCCCTGACGGGGCGCGACGTGATGGGGGCGGCCCAGACCGGCACCGGGAAGACCGCCGCGTTTTCCCTGCCGATCCTGCATCGCCTGATGCCGTTCGCCAGCAACAGCGCATCGCCCGCGCGGCATCCGGTGCGGGCGCTGATCCTGACCCCCACCCGCGAACTGGCCGACCAGATCCATGAAAACGTGCAGCGCTACAGCCAGTTCGTGCCCTTGCGCGCGGCCGTGGTCTTCGGCGGCGTGGACATCCGCCCGCAGAAAGAACAGCTGCGCCGGGGCTGCGAGATCCTGATCGCCACCCCCGGGCGGCTGCTGGATCACGTGGAACAGCGCAACGTGAATCTCGGCCAGGTCGGCATCCTGGTGCTGGACGAGGCCGACCGCATGCTGGACATGGGCTTCCTGCCCGACCTGGACCGCATCATGCGCCTGCTGCCCCCGGGGCGGCAGGGGCTGCTGTTCTCCGCCACGTTCAGCCCTGAAATCCGCAAGCTGGGCCGCAGCTTCCTGCGCACTCCTGTGGAAGTCGAAGTGGCCCGGCCCAATGCCACGGCCGACACCGTCACGCAAATTGCCTATCCCCTGGAAGGCGACGCCAAGCGCCGCGCCGTGGTGCATCTGGTGAAATCCCGCCAGCTCAGCCAGGTCATCGTGTTCTCCAACACGAAGATCGGCTGCAGCCGCCTGGCGCGGCAGCTGGAACAGGACGGCATCCGCGCGGAATCCATCCATGGCAACAAGTCCCAGATCGAACGCATGAAGGCCCTGGACGCCTTCAAGGCCGGCACGCTGGAAGTCCTGGTCGCCACGGACGTGGCCGCCCGGGGGCTGGACGTGGCCGGGATTCCCTGCGTCATCAATTACGACCTGCCGCGCAATCCCGAGGACTACGTGCACCGCATCGGCCGCACGGGCCGCGCCGGCGCGGAGGGCGAAGCCATCGCGTTGTTCGCCCCGGATGAAGAGCGCTATCTGCTGGACATCGAGAAACTCATCAAGACCAAGATCCCGCGCGGGGAACTGGAACTGCCGCGCGAACCCCGCCGCCGGCCGGTGGGGTCGCACCGCGCCTCCGGGCCGGGCTGGCATGCCCCGCAAGCCCCCCTGGATGACTTCTTCTCCAAACCGTACGTTCCGGCGGCCGTCAGCGACCAGCCCGCCGCGCCGGACGTGCGTCCCGCGGTCACGCCCGCGCGGCGTCCCGTCGGGGTGCTGCTGGGCGGCGCCCGCAAGTCCGACTGA
PROTEIN sequence
Length: 462
MTESTPTDPIAEQPVAFGQFGLHPGIMQAIEATGYTSATPIQAKAIPIALTGRDVMGAAQTGTGKTAAFSLPILHRLMPFASNSASPARHPVRALILTPTRELADQIHENVQRYSQFVPLRAAVVFGGVDIRPQKEQLRRGCEILIATPGRLLDHVEQRNVNLGQVGILVLDEADRMLDMGFLPDLDRIMRLLPPGRQGLLFSATFSPEIRKLGRSFLRTPVEVEVARPNATADTVTQIAYPLEGDAKRRAVVHLVKSRQLSQVIVFSNTKIGCSRLARQLEQDGIRAESIHGNKSQIERMKALDAFKAGTLEVLVATDVAARGLDVAGIPCVINYDLPRNPEDYVHRIGRTGRAGAEGEAIALFAPDEERYLLDIEKLIKTKIPRGELELPREPRRRPVGSHRASGPGWHAPQAPLDDFFSKPYVPAAVSDQPAAPDVRPAVTPARRPVGVLLGGARKSD*