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SCNpilot_solid_1_scaffold_3

Search features with annotation key words

Displaying items 121-150 of 445 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_3_120
Alcaligenes sp. EGD-AK7, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(121156..121284)
DNA (129bp) protein (43aa)
Uncharacterized protein n=3 Tax=Alcaligenes RepID=J0B6R3_ALCFA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERT55468.1}; TaxID=1386079 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes sp. EGD-
SCNpilot_solid_1_scaffold_3_121
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

121517..127204
DNA (5688bp) protein (1896aa)
Excinuclease ABC subunit n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GPP5_PUSST rbh
Excinuclease ABC subunit A, dimeric form rbh
UvrABC system protein A {ECO:0000256|SAAS:SAAS00088996}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella
SCNpilot_solid_1_scaffold_3_122
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

127201..128424
DNA (1224bp) protein (408aa)
Para-aminobenzoate synthase, aminase component (EC:2.6.1.85) rbh
Para-aminobenzoate synthase, aminase component {ECO:0000313|EMBL:CDM25385.1}; EC=2.6.1.85 {ECO:0000313|EMBL:CDM25385.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholde
Aminodeoxychorismate synthase n=2 Tax=Bordetella holmesii RepID=M5NL51_9BORD rbh
SCNpilot_solid_1_scaffold_3_123
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

128399..129112
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GPP7_PUSST
para-aminobenzoate synthase, component I
Para-aminobenzoate synthase, component I {ECO:0000313|EMBL:CDM25386.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="
SCNpilot_solid_1_scaffold_3_124
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

129314..129973
DNA (660bp) protein (220aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002EB39E9
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CDM23580.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_3_125
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(130018..130383)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GXG1_PUSST
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM23579.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_3_126
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

130639..131856
DNA (1218bp) protein (406aa)
Amino acid/amide ABC transporter substrate-binding protein, HAAT family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHC4_NITHX
Extracellular ligand-binding receptor rbh
Extracellular ligand-binding receptor {ECO:0000313|EMBL:CDM23578.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Cas
SCNpilot_solid_1_scaffold_3_127
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

131885..132748
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NQZ2_AFIFE
inner-membrane translocator rbh
Inner-membrane translocator {ECO:0000313|EMBL:CDM23577.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniell
SCNpilot_solid_1_scaffold_3_128
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

132745..133692
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NDE5_AFIFE
Branched-chain amino acid transport system permease protein LivM rbh
Branched-chain amino acid transport system permease protein LivM {ECO:0000313|EMBL:CDM23576.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Ca
SCNpilot_solid_1_scaffold_3_129
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

133689..134423
DNA (735bp) protein (245aa)
Putative branched-chain amino acid transporter ATP-binding protein n=1 Tax=Bordetella bronchiseptica Bbr77 RepID=K4TD64_BORBO
Branched-chain amino acid transport ATP-binding protein LivG rbh
Branched-chain amino acid transport ATP-binding protein LivG {ECO:0000313|EMBL:CDM23575.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castel
SCNpilot_solid_1_scaffold_3_130
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

134420..135154
DNA (735bp) protein (245aa)
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHC0_NITHX
Branched-chain amino acid transport ATP-binding protein LivF rbh
Branched-chain amino acid transport ATP-binding protein LivF {ECO:0000313|EMBL:CDM23574.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castel
SCNpilot_solid_1_scaffold_3_131
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(135166..136128)
DNA (963bp) protein (321aa)
Transcriptional regulator CysB-like protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GXG2_PUSST rbh
Alkanesulfonate utilization operon LysR-family regulator CbI rbh
Alkanesulfonate utilization operon LysR-family regulator CbI {ECO:0000313|EMBL:CDM23573.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castel
SCNpilot_solid_1_scaffold_3_132
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(136291..137784)
DNA (1494bp) protein (498aa)
Methylmalonate-semialdehyde dehydrogenase (EC:1.2.1.27) rbh
Methylmalonate-semialdehyde dehydrogenase {ECO:0000313|EMBL:CDM23572.1}; EC=1.2.1.27 {ECO:0000313|EMBL:CDM23572.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiale
Putative oxidoreductase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GXG3_PUSST rbh
SCNpilot_solid_1_scaffold_3_133
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

137963..138925
DNA (963bp) protein (321aa)
LysR family transcriptional regulator n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GXG6_PUSST rbh
LysR family transcriptional regulator rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:AEC20214.1}; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusil
SCNpilot_solid_1_scaffold_3_134
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(138942..140063)
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GXG7_PUSST rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CDM23570.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_3_135
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

140164..141660
DNA (1497bp) protein (499aa)
Cytosol aminopeptidase PepA (EC:3.4.11.1) rbh
Probable cytosol aminopeptidase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GXG8_PUSST rbh
Probable cytosol aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucyl aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; TaxID=1437824 spec
SCNpilot_solid_1_scaffold_3_136
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

141657..142100
DNA (444bp) protein (148aa)
DNA polymerase III chi subunit (EC:2.7.7.7)
DNA polymerase III chi subunit {ECO:0000313|EMBL:CDM23568.1}; EC=2.7.7.7 {ECO:0000313|EMBL:CDM23568.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligen
DNA polymerase III, chi subunit n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GXG9_PUSST
SCNpilot_solid_1_scaffold_3_137
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

142211..142912
DNA (702bp) protein (234aa)
Inner membrane protein YccA n=2 Tax=Alcaligenes RepID=M5J2Z8_9BURK rbh
Integral membrane protein, interacts with FtsH rbh
Integral membrane protein, interacts with FtsH {ECO:0000313|EMBL:CDM23567.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" so
SCNpilot_solid_1_scaffold_3_138
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(142994..143878)
DNA (885bp) protein (295aa)
RarD protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GXH1_PUSST rbh
Protein rarD rbh
Protein rarD {ECO:0000313|EMBL:CDM23566.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65
SCNpilot_solid_1_scaffold_3_139
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(143900..144490)
DNA (591bp) protein (197aa)
DNA repair protein RecO n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GXH3_PUSST
DNA recombination and repair protein RecO rbh
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=1437824 species="Bacteria; Proteobacteria; Be
SCNpilot_solid_1_scaffold_3_140
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(144483..145415)
DNA (933bp) protein (311aa)
GTPase Era n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GXH4_PUSST rbh
GTP-binding protein Era rbh
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" sou
SCNpilot_solid_1_scaffold_3_141
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(145412..146167)
DNA (756bp) protein (252aa)
Ribonuclease III (EC:3.1.26.3) rbh
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule
ribonuclease III n=1 Tax=Pusillimonas noertemannii RepID=UPI0002F3A30F rbh
SCNpilot_solid_1_scaffold_3_142
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(146167..147054)
DNA (888bp) protein (296aa)
Signal peptidase I (EC:3.4.21.89) rbh
Signal peptidase I {ECO:0000256|RuleBase:RU003993, ECO:0000313|EMBL:CDM23562.1}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU003993, ECO:0000313|EMBL:CDM23562.1};; TaxID=1437824 species="Bacteria; Proteobact
Signal peptidase I n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GXH6_PUSST rbh
SCNpilot_solid_1_scaffold_3_143
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(147064..148857)
DNA (1794bp) protein (598aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP
Elongation factor 4 n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GXH7_PUSST rbh
Translation elongation factor LepA rbh
SCNpilot_solid_1_scaffold_3_144
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(149011..150495)
DNA (1485bp) protein (495aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI000370B708 rbh
HtrA protease/chaperone protein {ECO:0000313|EMBL:CDM23559.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellan
HtrA protease/chaperone protein rbh
SCNpilot_solid_1_scaffold_3_145
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(150519..151532)
DNA (1014bp) protein (338aa)
Putative sigma factor regulatory protein n=4 Tax=Bordetella RepID=K0ML63_BORPB rbh
Sigma factor RpoE negative regulatory protein RseB precursor rbh
Sigma factor RpoE negative regulatory protein RseB {ECO:0000313|EMBL:CDM23558.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;
SCNpilot_solid_1_scaffold_3_146
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(151532..152038)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GXI0_PUSST
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM23557.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_3_147
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(152048..152647)
DNA (600bp) protein (200aa)
RNA polymerase sigma factor RpoE n=1 Tax=Pusillimonas noertemannii RepID=UPI0003140CA4 rbh
RNA polymerase sigma factor RpoE rbh
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellanie
SCNpilot_solid_1_scaffold_3_148
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(152667..153950)
DNA (1284bp) protein (428aa)
3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC:2.3.1.179) rbh
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447, ECO:0000313|EMBL:CDM23555.1};; TaxID=1437824 species="Bacteria; Proteobacteria
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GXI3_PUSST rbh
SCNpilot_solid_1_scaffold_3_149
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(154037..154276)
DNA (240bp) protein (80aa)
Acyl carrier protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GXI4_PUSST
Acyl carrier protein
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria
Displaying items 121-150 of 445 in total

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