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SCNpilot_solid_1_scaffold_3

Search features with annotation key words

Displaying items 151-180 of 445 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_3_150
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(154462..155202)
DNA (741bp) protein (247aa)
3-oxoacyl-[acyl-carrier protein] reductase (EC:1.1.1.100) rbh
3-oxoacyl-[acyl-carrier protein] reductase {ECO:0000313|EMBL:CDM23552.1}; EC=1.1.1.100 {ECO:0000313|EMBL:CDM23552.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderia
3-ketoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GXI5_PUSST rbh
SCNpilot_solid_1_scaffold_3_151
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(155204..156136)
DNA (933bp) protein (311aa)
Malonyl CoA-acyl carrier protein transacylase (EC:2.3.1.39) rbh
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446, ECO:0000313|EMBL:CDM23551.1}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446, ECO:0000313|EMBL:CDM23551.1};; TaxID=1437824 spe
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GXI6_PUSST rbh
SCNpilot_solid_1_scaffold_3_152
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(156148..157122)
DNA (975bp) protein (325aa)
3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC:2.3.1.180) rbh
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815, ECO:0000313|EMBL:CDM23550.1};; 3-oxoacyl-[acyl-carrier-protein] synthase I
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GXI7_PUSST rbh
SCNpilot_solid_1_scaffold_3_153
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(157142..158164)
DNA (1023bp) protein (341aa)
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase
Phosphate acyltransferase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GXI8_PUSST rbh
Phosphate:acyl-ACP acyltransferase PlsX rbh
SCNpilot_solid_1_scaffold_3_154
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(158229..158411)
DNA (183bp) protein (61aa)
50S ribosomal protein L32 n=1 Tax=Advenella kashmirensis (strain DSM 17095 / LMG 22695 / WT001) RepID=I3UB73_ADVKW
LSU ribosomal protein L32p / LSU ribosomal protein L32p, zinc-independent
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellanie
SCNpilot_solid_1_scaffold_3_155
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(158477..158983)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Alcaligenes faecalis subsp. faecalis NCIB 8687 RepID=J0UW55_ALCFA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM23547.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_3_156
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

159099..159686
DNA (588bp) protein (196aa)
Septum formation protein Maf n=1 Tax=Alcaligenes sp. EGD-AK7 RepID=U1XW94_9BURK
Septum formation protein Maf
Maf-like protein BN940_05386 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castella
SCNpilot_solid_1_scaffold_3_157
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

159692..160399
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GXJ2_PUSST rbh
Tetrapyrrole methylase family protein rbh
Tetrapyrrole methylase family protein {ECO:0000313|EMBL:CDM23545.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Cas
SCNpilot_solid_1_scaffold_3_158
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(160406..161173)
DNA (768bp) protein (256aa)
Hydrolase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GXJ8_PUSST
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CDM23542.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_3_159
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(161170..162225)
DNA (1056bp) protein (352aa)
Ribosomal large subunit pseudouridine synthase C (EC:4.2.1.70) rbh
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenace
Pseudouridine synthase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GXJ9_PUSST rbh
SCNpilot_solid_1_scaffold_3_160
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

162596..165589
DNA (2994bp) protein (998aa)
Ribonuclease E (EC:3.1.26.12) rbh
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970, ECO:0000313|EMBL:CDM23540.1}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970, ECO:0000313|EMBL:CDM2354
Ribonuclease E n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GXK1_PUSST rbh
SCNpilot_solid_1_scaffold_3_161
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(165721..166602)
DNA (882bp) protein (294aa)
Acetyl-coenzyme A carboxyl transferase beta chain (EC:6.4.1.2) rbh
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GXK2_PUSST
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395}; Short=ACCase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; Short=Acetyl-CoA carboxylase carboxyltr
SCNpilot_solid_1_scaffold_3_162
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(166599..167432)
DNA (834bp) protein (278aa)
Tryptophan synthase alpha chain (EC:4.2.1.20)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00031177}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00108586};; TaxID=1437824 species="
Tryptophan synthase alpha chain n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GXK3_PUSST
SCNpilot_solid_1_scaffold_3_163
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(167442..168641)
DNA (1200bp) protein (400aa)
Tryptophan synthase beta chain (EC:4.2.1.20) rbh
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133, ECO:0000313|EMBL:CDM23536.1}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133, ECO:0000313|EMBL:CDM23536.1};; TaxID=1437824 species="Bacte
Tryptophan synthase beta chain n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=TRPB_BORPD rbh
SCNpilot_solid_1_scaffold_3_164
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(168767..170965)
DNA (2199bp) protein (733aa)
GTP pyrophosphokinase (EC:2.7.6.5) rbh
GTP pyrophosphokinase {ECO:0000313|EMBL:CDM23535.1}; EC=2.7.6.5 {ECO:0000313|EMBL:CDM23535.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Ca
GTP pyrophosphokinase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GXK6_PUSST rbh
SCNpilot_solid_1_scaffold_3_165
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

171186..171512
DNA (327bp) protein (109aa)
Ferredoxin n=1 Tax=Alcaligenes faecalis subsp. faecalis NCIB 8687 RepID=J0UW70_ALCFA
4Fe-4S ferredoxin, iron-sulfur binding
4Fe-4S ferredoxin, iron-sulfur binding {ECO:0000313|EMBL:CDM23533.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Ca
SCNpilot_solid_1_scaffold_3_166
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

171707..172924
DNA (1218bp) protein (406aa)
Intracellular PHB depolymerase n=1 Tax=Bordetella bronchiseptica D445 RepID=K4TLV6_BORBO rbh
Intracellular PHB depolymerase rbh
Intracellular PHB depolymerase {ECO:0000313|EMBL:CDM23532.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellani
SCNpilot_solid_1_scaffold_3_167
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

173029..173640
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GMG7_PUSST
Electron transport complex protein RnfB rbh
Electron transport complex protein RnfB {ECO:0000313|EMBL:CDM23531.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="C
SCNpilot_solid_1_scaffold_3_168
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

173637..174275
DNA (639bp) protein (213aa)
Endonuclease III (EC:4.2.99.18) rbh
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) l
Endonuclease III n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GMG8_PUSST rbh
SCNpilot_solid_1_scaffold_3_169
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

174410..175192
DNA (783bp) protein (261aa)
Branched chain ABC transporter ATP-binding protein n=1 Tax=Advenella kashmirensis (strain DSM 17095 / LMG 22695 / WT001) RepID=I3UHE9_ADVKW rbh
Branched-chain amino acid transport ATP-binding protein LivG rbh
Branched-chain amino acid transport ATP-binding protein LivG {ECO:0000313|EMBL:CDM23529.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castel
SCNpilot_solid_1_scaffold_3_170
unknown

Not on your lists

175189..175341
DNA (153bp) protein (51aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_3_171
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

175338..176051
DNA (714bp) protein (238aa)
ABC transporter ATP-binding protein n=1 Tax=Bordetella avium (strain 197N) RepID=Q2KUP8_BORA1
Branched-chain amino acid transport ATP-binding protein LivF rbh
Branched-chain amino acid transport ATP-binding protein LivF {ECO:0000313|EMBL:CDM23528.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castel
SCNpilot_solid_1_scaffold_3_172
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

176106..177317
DNA (1212bp) protein (404aa)
ABC-transporter, substrate binding protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IIA8_BORPD
Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein rbh
Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein {ECO:0000313|EMBL:CDM23527.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenac
SCNpilot_solid_1_scaffold_3_173
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

177406..178293
DNA (888bp) protein (296aa)
ABC transporter, permease protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GMH2_PUSST rbh
High-affinity branched-chain amino acid transport system permease protein LivH rbh
High-affinity branched-chain amino acid transport system permease protein LivH {ECO:0000313|EMBL:CDM23526.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alca
SCNpilot_solid_1_scaffold_3_174
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

178290..179267
DNA (978bp) protein (326aa)
Putative branched-chain amino acid transport permease n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GMH3_PUSST rbh
Branched-chain amino acid transport system permease protein LivM rbh
Branched-chain amino acid transport system permease protein LivM {ECO:0000313|EMBL:CDM23525.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Ca
SCNpilot_solid_1_scaffold_3_175
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(179379..180581)
DNA (1203bp) protein (401aa)
Putative ABC transporter, substrate binding protein possible branched chain amino acid binding protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AX23_AZOBR rbh
putative ABC transporter, substrate binding protein; possible branched chain amino acid binding protein
Putative ABC transporter, substrate binding protein possible branched chain amino acid binding protein {ECO:0000313|EMBL:CCD02432.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacter
SCNpilot_solid_1_scaffold_3_176
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(180805..181554)
DNA (750bp) protein (250aa)
Putative branched-chain amino acid ABC transporter, ATP-binding protein n=1 Tax=Bordetella avium (strain 197N) RepID=Q2KUR4_BORA1 rbh
Branched-chain amino acid transport ATP-binding protein LivF rbh
Branched-chain amino acid transport ATP-binding protein LivF {ECO:0000313|EMBL:CDM23524.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castel
SCNpilot_solid_1_scaffold_3_177
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(181551..183410)
DNA (1860bp) protein (620aa)
Putative branched-chain amino acid transport system protein n=7 Tax=Bordetella RepID=K0MWG0_BORBM rbh
ABC-type branched-chain amino acid transport systems, ATPase component {ECO:0000313|EMBL:CDM23523.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenace
ABC-type branched-chain amino acid transport systems, ATPase component rbh
SCNpilot_solid_1_scaffold_3_178
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(183415..184452)
DNA (1038bp) protein (346aa)
Branched-chain amino acid transport system permease protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GMH7_PUSST rbh
High-affinity branched-chain amino acid transport system permease protein LivH rbh
High-affinity branched-chain amino acid transport system permease protein LivH {ECO:0000313|EMBL:CDM23522.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alca
SCNpilot_solid_1_scaffold_3_179
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(184519..185688)
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GMH8_PUSST rbh
Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein rbh
Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein {ECO:0000313|EMBL:CDM23521.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenac
Displaying items 151-180 of 445 in total

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