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SCNpilot_solid_1_scaffold_3_159

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(161170..162225)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal large subunit pseudouridine synthase C (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 84.4
  • Coverage: 315.0
  • Bit_score: 530
  • Evalue 2.70e-148
  • rbh
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenace similarity UNIPROT
DB: UniProtKB
  • Identity: 84.4
  • Coverage: 315.0
  • Bit_score: 530
  • Evalue 1.30e-147
Pseudouridine synthase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GXJ9_PUSST similarity UNIREF
DB: UNIREF100
  • Identity: 67.5
  • Coverage: 323.0
  • Bit_score: 444
  • Evalue 9.00e-122
  • rbh

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1056
ATGATGTCCCTGCAGCCCGGCGGAGCGCATGCCTTGCGTCTCTACGTCTGGCGGTTTTCGGCCTCTATAGGCTGTTGCGATTATATGCCGCTTTTCCCTATGCGCAAAATAGATATGTCACCCGAGCGCCAACCGGCCGTGCGCCAGGTGGTGGTGGACAGTGAATCGGCGGGTCAGCGGCTGGACAACTTTCTGCTGCGCCTGAACAAGGGCGTGCCCAAAAGCCACCTGTACAAGGCCATCCGCGACGGCCAGGTGCGCATCAACAAGGGCCGCTGCCGCGCCGATACCCGGGTGCAGGCCGGCGACCTGGTGCGCATCCCGCCGCTGCGCCTGCCCGATCCCGCCGCCCGGCCGGCCGCGCCGCCGGCGACGTTTCCCGTCCTGTACGAAGACGCCCACCTGCTGGTCATCGACAAGCCCGCCGGCGTGGCCGTGCACGGCGGCAGCGGCGTGTCCTTCGGGGTGATCGAACAACTGCGCGCCGCCCGCCCCGACGAACGCCTGCTGGAACTGGCCCACCGGCTGGACCGGGAAACCTCCGGCGTGCTGATGGTGGCCCGCAGCCGCAAGGCCCTGGTGGCCCTGCACGACATGATGCGCAACAGCCTGGGCCGCAAGCACTATCTGGCCCTGGCGGTGGGCGACTGGGTCAATGATCGCCAGCATATCCGCCTGCCGCTGCTGAAATATCTGACCCCGGGCGGCGAGCGCCGCGTGCGGGTCGATCCCCTGGGCAAGCCCGCGCACACCATCGTCACCCTGAAGCGCCGCTATGGCGGCGCCTATTCCCTGGTGGGCGCCGAGCTGCGCACCGGGCGCACCCACCAGATCCGGGTGCATCTGGCGTCCCAGGGCCATCCCATCGCGGGCGACGAGAAATACGGGCCGGACGAGATCCGCGCGGCCCTCTTCGCCCAGGGCTTCCGGCGCATGTTCCTGCATGCCCACCGGCTGGACATCCCCCATCCCGTGACGGGCGAACCCCTGGCGCTGGAAGCGCCCCTGCCGCCCGCCTGCCAGGCGGTGCTGGACTGGCTGGAGTCGAAACAATGA
PROTEIN sequence
Length: 352
MMSLQPGGAHALRLYVWRFSASIGCCDYMPLFPMRKIDMSPERQPAVRQVVVDSESAGQRLDNFLLRLNKGVPKSHLYKAIRDGQVRINKGRCRADTRVQAGDLVRIPPLRLPDPAARPAAPPATFPVLYEDAHLLVIDKPAGVAVHGGSGVSFGVIEQLRAARPDERLLELAHRLDRETSGVLMVARSRKALVALHDMMRNSLGRKHYLALAVGDWVNDRQHIRLPLLKYLTPGGERRVRVDPLGKPAHTIVTLKRRYGGAYSLVGAELRTGRTHQIRVHLASQGHPIAGDEKYGPDEIRAALFAQGFRRMFLHAHRLDIPHPVTGEPLALEAPLPPACQAVLDWLESKQ*