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SCNpilot_solid_1_scaffold_3

Search features with annotation key words

Displaying items 181-210 of 445 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_3_180
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

185842..186369
DNA (528bp) protein (176aa)
Peptide methionine sulfoxide reductase MsrB (EC:1.8.4.12)
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400, ECO:0000313|EMBL:CDM23520.1}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400, ECO:0000313|EMBL:CDM23520.1};; Peptide-methion
Peptide methionine sulfoxide reductase MsrB n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9II81_BORPD
SCNpilot_solid_1_scaffold_3_181
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

186366..186947
DNA (582bp) protein (194aa)
Intracellular septation protein A n=39 Tax=Bordetella RepID=V8U715_BORPT
Intracellular septation protein IspA rbh
Probable intracellular septation protein A {ECO:0000256|HAMAP-Rule:MF_00189, ECO:0000256|SAAS:SAAS00082307}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcal
SCNpilot_solid_1_scaffold_3_182
unknown

Not on your lists

comp(186968..187150)
DNA (183bp) protein (61aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_3_183
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

187243..188037
DNA (795bp) protein (265aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenac
peptidyl-prolyl cis-trans isomerase n=1 Tax=Pusillimonas noertemannii RepID=UPI00031419BD rbh
putative peptidyl-prolyl cis-trans isomerase rbh
SCNpilot_solid_1_scaffold_3_184
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(188127..190277)
DNA (2151bp) protein (717aa)
DNA ligase (EC:6.5.1.2) rbh
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {EC
DNA ligase n=1 Tax=Ralstonia sp. PBA RepID=I9BVL2_9RALS
SCNpilot_solid_1_scaffold_3_185
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(190274..191266)
DNA (993bp) protein (331aa)
Cell division protein ZipA n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GMI4_PUSST rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CDM23515.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_3_186
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(191286..194819)
DNA (3534bp) protein (1178aa)
Chromosome partition protein Smc n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=SMC_BORPD rbh
Chromosome partition protein smc rbh
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Cast
SCNpilot_solid_1_scaffold_3_187
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

195010..196296
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GMI6_PUSST rbh
Probable transmembrane protein rbh
Probable transmembrane protein {ECO:0000313|EMBL:CDM23513.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellani
SCNpilot_solid_1_scaffold_3_188
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(196336..197214)
DNA (879bp) protein (293aa)
Uracil-DNA glycosylase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GMI7_PUSST
Uracil-DNA glycosylase, family 4 rbh
Uracil-DNA glycosylase, family 4 {ECO:0000313|EMBL:CDM23512.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castella
SCNpilot_solid_1_scaffold_3_189
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(197211..198452)
DNA (1242bp) protein (414aa)
rimI; ribosomal-protein-alanine acetyltransferase (EC:2.3.1.128) rbh
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:ADP14821.1}; EC=2.3.1.128 {ECO:0000313|EMBL:ADP14821.1};; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderia
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI000319DC3A rbh
SCNpilot_solid_1_scaffold_3_190
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

198608..199342
DNA (735bp) protein (245aa)
chemotaxis protein CheY n=1 Tax=Pusillimonas noertemannii RepID=UPI000319458F rbh
Two-component system response regulator OmpR rbh
Two-component system response regulator OmpR {ECO:0000313|EMBL:CDM23509.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" sour
SCNpilot_solid_1_scaffold_3_191
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

199388..200779
DNA (1392bp) protein (464aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Ca
histidine kinase n=1 Tax=Pusillimonas noertemannii RepID=UPI0002F93CFA rbh
Osmolarity sensory histidine kinase EnvZ rbh
SCNpilot_solid_1_scaffold_3_192
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

200825..201373
DNA (549bp) protein (183aa)
Alkyl hydroperoxide reductase n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9II51_BORPD rbh
Alkyl hydroperoxide reductase protein C rbh
Alkyl hydroperoxide reductase protein C {ECO:0000313|EMBL:CDM23507.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="C
SCNpilot_solid_1_scaffold_3_193
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(201406..201921)
DNA (516bp) protein (172aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=ISPF_BORPD
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {E
SCNpilot_solid_1_scaffold_3_194
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(201978..202766)
DNA (789bp) protein (263aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60) rbh
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493};
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Bordetella sp. FB-8 RepID=UPI000375C477
SCNpilot_solid_1_scaffold_3_195
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

202941..203564
DNA (624bp) protein (208aa)
4-Hydroxy-2-oxoglutarate aldolase / 2-dehydro-3-deoxyphosphogluconate aldolase (EC:4.1.2.14 4.1.3.16) rbh
4-Hydroxy-2-oxoglutarate aldolase / 2-dehydro-3-deoxyphosphogluconate aldolase {ECO:0000313|EMBL:CDM23503.1}; EC=4.1.2.14 {ECO:0000313|EMBL:CDM23503.1};; EC=4.1.3.16 {ECO:0000313|EMBL:CDM23503.1};; Ta
2-dehydro-3-deoxy-phosphogluconate aldolase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GX68_PUSST
SCNpilot_solid_1_scaffold_3_196
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(203574..204551)
DNA (978bp) protein (326aa)
D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95) rbh
D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:CDM23502.1}; EC=1.1.1.95 {ECO:0000313|EMBL:CDM23502.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alca
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GX67_PUSST rbh
SCNpilot_solid_1_scaffold_3_197
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(204548..205492)
DNA (945bp) protein (315aa)
2-dehydro-3-deoxygluconate kinase (EC:2.7.1.45) rbh
2-dehydro-3-deoxygluconate kinase {ECO:0000313|EMBL:CDM23501.1}; EC=2.7.1.45 {ECO:0000313|EMBL:CDM23501.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcal
PfkB n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GX66_PUSST rbh
SCNpilot_solid_1_scaffold_3_198
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(205485..206273)
DNA (789bp) protein (263aa)
Xylose isomerase domain-containing protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GX65_PUSST
Epimerase KguE rbh
Epimerase KguE {ECO:0000313|EMBL:CDM23500.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans
SCNpilot_solid_1_scaffold_3_199
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(206285..207049)
DNA (765bp) protein (255aa)
L-amino acid ABC transporter, ATP-binding protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GX64_PUSST rbh
ABC transporter ATP-binding protein rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDM23499.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Caste
SCNpilot_solid_1_scaffold_3_200
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(207072..207881)
DNA (810bp) protein (270aa)
Extracellular solute-binding protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GX63_PUSST rbh
extracellular solute-binding protein, family 3
Extracellular solute-binding protein, family 3 {ECO:0000313|EMBL:CDM23498.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" so
SCNpilot_solid_1_scaffold_3_201
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(207943..208599)
DNA (657bp) protein (219aa)
Polar amino acid ABC transporter, inner membrane subunit n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GX62_PUSST rbh
polar amino acid ABC transporter, inner membrane subunit rbh
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:CDM23497.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellani
SCNpilot_solid_1_scaffold_3_202
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(208599..209270)
DNA (672bp) protein (224aa)
Polar amino acid ABC transporter, inner membrane subunit n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GX61_PUSST rbh
polar amino acid ABC transporter, inner membrane subunit rbh
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:CDM23496.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellani
SCNpilot_solid_1_scaffold_3_203
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(209390..210412)
DNA (1023bp) protein (341aa)
LacI family transcription regulator n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GX60_PUSST rbh
2-ketogluconate utilization repressor PtxS rbh
2-ketogluconate utilization repressor PtxS {ECO:0000313|EMBL:CDM23495.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source
SCNpilot_solid_1_scaffold_3_204
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

210572..211417
DNA (846bp) protein (282aa)
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI000379A7DC rbh
Phosphogluconate repressor HexR, RpiR family rbh
Phosphogluconate repressor HexR, RpiR family {ECO:0000313|EMBL:CDM23490.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" sour
SCNpilot_solid_1_scaffold_3_205
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

211417..214896
DNA (3480bp) protein (1160aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=340100 species="Bacteria; Pr
Transcription-repair-coupling factor n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9II42_BORPD rbh
mfd; transcription-repair coupling factor
SCNpilot_solid_1_scaffold_3_206
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

215114..217243
DNA (2130bp) protein (710aa)
TonB-dependent siderophore receptor n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GU30_PUSST rbh
TonB-dependent siderophore receptor rbh
TonB-dependent siderophore receptor {ECO:0000313|EMBL:CDM23488.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Caste
SCNpilot_solid_1_scaffold_3_207
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

217234..218547
DNA (1314bp) protein (438aa)
Major facilitator transporter n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6Z0I4_9RHOO rbh
Major facilitator superfamily (MFS_1) transporter rbh
Major facilitator superfamily (MFS_1) transporter {ECO:0000313|EMBL:CDM23487.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;"
SCNpilot_solid_1_scaffold_3_208
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(218544..220691)
DNA (2148bp) protein (716aa)
Protease II n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6Y1R6_9RHOO rbh
Oligopeptidase B rbh
Oligopeptidase B {ECO:0000313|EMBL:CDM23486.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragran
SCNpilot_solid_1_scaffold_3_209
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

220908..223148
DNA (2241bp) protein (747aa)
UPI0003D61824 related cluster n=1 Tax=unknown RepID=UPI0003D61824 rbh
Ferrichrome-iron receptor rbh
Ferrichrome-iron receptor {ECO:0000313|EMBL:CDM23485.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella
Displaying items 181-210 of 445 in total

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