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SCNpilot_solid_1_scaffold_3

Search features with annotation key words

Displaying items 211-240 of 445 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_3_210
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

223148..223906
DNA (759bp) protein (253aa)
SEL1 subfamily protein n=1 Tax=Burkholderia multivorans (strain ATCC 17616 / 249) RepID=A9APE8_BURM1
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CDM23484.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_3_211
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

223900..224592
DNA (693bp) protein (231aa)
PKHD-type hydroxylase BN940_05071 {ECO:0000256|HAMAP-Rule:MF_00657}; EC=1.14.11.- {ECO:0000256|HAMAP-Rule:MF_00657};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderial
PKHD-type hydroxylase QWA_12932 n=1 Tax=Alcaligenes faecalis subsp. faecalis NCIB 8687 RepID=J0B779_ALCFA
Iron-uptake factor PiuC rbh
SCNpilot_solid_1_scaffold_3_212
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(224621..225826)
DNA (1206bp) protein (402aa)
Cyanate transporter n=1 Tax=Pseudomonas putida CSV86 RepID=L1M2Q7_PSEPU rbh
Cyanate transport protein CynX
Cyanate transporter {ECO:0000313|EMBL:EKX85261.1}; TaxID=1005395 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida CS
SCNpilot_solid_1_scaffold_3_213
Rhodovulum sulfidophilum, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(225879..226607)
DNA (729bp) protein (243aa)
Transcriptional regulator, GntR family n=1 Tax=Salipiger mucosus DSM 16094 RepID=S9QWC2_9RHOB
Transcriptional regulator, GntR family {ECO:0000313|EMBL:BAQ70842.1}; TaxID=35806 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodo
GntR family transcriptional regulator
SCNpilot_solid_1_scaffold_3_214
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(226645..227409)
DNA (765bp) protein (255aa)
enoyl-CoA hydratase n=1 Tax=Nafulsella turpanensis RepID=UPI000347F266
Short chain enoyl-CoA hydratase {ECO:0000313|EMBL:AHM59859.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flam
enoyl-CoA hydratase/isomerase
SCNpilot_solid_1_scaffold_3_215
Rhodovulum sulfidophilum, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(227406..227933)
DNA (528bp) protein (176aa)
MaoC-like domain-containing protein n=1 Tax=Variovorax paradoxus B4 RepID=T1X9Y2_VARPD
Putative monoamine oxidase regulatory protein {ECO:0000313|EMBL:BAQ70843.1}; TaxID=35806 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source
MaoC-like domain-containing protein
SCNpilot_solid_1_scaffold_3_216
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(227984..228925)
DNA (942bp) protein (314aa)
dihydrodipicolinate synthase (EC:4.2.1.52)
Dihydrodipicolinate synthase n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UCZ8_RHIRD rbh
Dihydrodipicolinate synthase {ECO:0000313|EMBL:EGP55326.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacteriu
SCNpilot_solid_1_scaffold_3_217
Burkholderia andropogonis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(228918..230501)
DNA (1584bp) protein (528aa)
Acetate CoA-transferase YdiF {ECO:0000256|PIRNR:PIRNR000858}; EC=2.8.3.8 {ECO:0000256|PIRNR:PIRNR000858};; TaxID=28092 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholde
CoA transferase n=1 Tax=Bradyrhizobium japonicum RepID=UPI000377CAFC rbh
putative acyl-CoA transferase
SCNpilot_solid_1_scaffold_3_218
Rhodovulum sulfidophilum, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(230513..231655)
DNA (1143bp) protein (381aa)
acyl-CoA dehydrogenase (EC:1.3.99.-)
Butyryl-CoA dehydrogenase n=1 Tax=Salipiger mucosus DSM 16094 RepID=S9R150_9RHOB rbh
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:BAQ70844.1}; TaxID=35806 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sulfidophi
SCNpilot_solid_1_scaffold_3_219
Rhodovulum sulfidophilum, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(231706..232083)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601) RepID=Q0FKR5_PELBH
Uncharacterized protein {ECO:0000313|EMBL:BAQ70845.1}; TaxID=35806 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sulfidoph
hypothetical protein
SCNpilot_solid_1_scaffold_3_220
Pelagibaca bermudensis, Pelagibaca, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

232204..233082
DNA (879bp) protein (293aa)
dihydrodipicolinate synthase (EC:4.2.1.52)
Dihydrodipicolinate synthase n=1 Tax=Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601) RepID=Q0FKR4_PELBH rbh
Dihydrodipicolinate synthase {ECO:0000313|EMBL:EAU44748.1}; TaxID=314265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pelagibaca.;" source="Pelagibaca ber
SCNpilot_solid_1_scaffold_3_221
Pelagibaca bermudensis, Pelagibaca, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

233145..234143
DNA (999bp) protein (333aa)
Putative ABC transporter periplasmic solute-binding protein n=1 Tax=Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601) RepID=Q0FKR3_PELBH rbh
Putative ABC transporter periplasmic solute-binding protein {ECO:0000313|EMBL:EAU44749.1}; TaxID=314265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pelag
C4-dicarboxylate transporter
SCNpilot_solid_1_scaffold_3_222
Rhodovulum sulfidophilum, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

234209..234742
DNA (534bp) protein (178aa)
C4-dicarboxylate transport system permease small protein n=1 Tax=Salipiger mucosus DSM 16094 RepID=S9R154_9RHOB
C4-dicarboxylate transport system permease small protein {ECO:0000313|EMBL:BAQ70848.1}; TaxID=35806 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulu
C4-dicarboxylate transport system permease small protein
SCNpilot_solid_1_scaffold_3_223
Pelagibaca bermudensis, Pelagibaca, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

234739..236025
DNA (1287bp) protein (429aa)
DctMQ fusion protein (C4-dicarboxylate transporter) n=1 Tax=Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601) RepID=Q0FKR1_PELBH rbh
DctMQ fusion protein (C4-dicarboxylate transporter) {ECO:0000313|EMBL:EAU44751.1}; TaxID=314265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pelagibaca.;"
C4-dicarboxylate ABC transporter
SCNpilot_solid_1_scaffold_3_224
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(236037..236888)
DNA (852bp) protein (284aa)
Phosphoserine phosphatase (EC:3.1.3.3)
Phosphoserine phosphatase {ECO:0000313|EMBL:CDM23480.1}; EC=3.1.3.3 {ECO:0000313|EMBL:CDM23480.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae
Phosphoserine phosphatase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GMJ5_PUSST rbh
SCNpilot_solid_1_scaffold_3_225
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

237034..238131
DNA (1098bp) protein (366aa)
L-lactate dehydrogenase (EC:1.1.2.3) rbh
L-lactate dehydrogenase {ECO:0000313|EMBL:CDM23477.1}; EC=1.1.2.3 {ECO:0000313|EMBL:CDM23477.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae;
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002FCD23B rbh
SCNpilot_solid_1_scaffold_3_226
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(238178..238759)
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI000316FD71
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM23475.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_3_227
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(238773..240257)
DNA (1485bp) protein (495aa)
NADH-ubiquinone oxidoreductase chain N (EC:1.6.5.3) rbh
NADH-quinone oxidoreductase subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_00445};; NADH dehydrogenase I subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; NDH-1 subunit
NADH-quinone oxidoreductase subunit N n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GMJ7_PUSST rbh
SCNpilot_solid_1_scaffold_3_228
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(240270..241769)
DNA (1500bp) protein (500aa)
NADH-ubiquinone oxidoreductase chain M (EC:1.6.5.3) rbh
NADH-ubiquinone oxidoreductase chain M {ECO:0000313|EMBL:CDM23473.1}; EC=1.6.5.3 {ECO:0000313|EMBL:CDM23473.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; A
Putative monovalent cation/H+ antiporter subunit A n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GMJ8_PUSST rbh
SCNpilot_solid_1_scaffold_3_229
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(241769..243823)
DNA (2055bp) protein (685aa)
NADH-ubiquinone oxidoreductase chain L {ECO:0000313|EMBL:CDM23472.1}; EC=1.6.5.3 {ECO:0000313|EMBL:CDM23472.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; A
NADH-ubiquinone oxidoreductase chain L (EC:1.6.5.3) rbh
NADH:ubiquinone oxidoreductase subunit L n=1 Tax=Pusillimonas noertemannii RepID=UPI000300C8E9 rbh
SCNpilot_solid_1_scaffold_3_230
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(243831..244142)
DNA (312bp) protein (104aa)
NADH-ubiquinone oxidoreductase chain K (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01456};; NADH dehydrogenase I subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; NDH-1 subunit
NADH-quinone oxidoreductase subunit K n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GMK0_PUSST
SCNpilot_solid_1_scaffold_3_231
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(244139..244768)
DNA (630bp) protein (210aa)
NADH-ubiquinone oxidoreductase chain J (EC:1.6.5.3) rbh
NADH-ubiquinone oxidoreductase chain J {ECO:0000313|EMBL:CDM23470.1}; EC=1.6.5.3 {ECO:0000313|EMBL:CDM23470.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; A
NADH-ubiquinone oxidoreductase, chain J n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GMK1_PUSST
SCNpilot_solid_1_scaffold_3_232
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(244785..245273)
DNA (489bp) protein (163aa)
NADH-ubiquinone oxidoreductase chain I (EC:1.6.5.3) rbh
NADH-quinone oxidoreductase subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01351};; NADH dehydrogenase I subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; NDH-1 subunit
NADH-quinone oxidoreductase subunit I n=3 Tax=Alcaligenes RepID=J0UVC2_ALCFA rbh
SCNpilot_solid_1_scaffold_3_233
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(245284..246357)
DNA (1074bp) protein (358aa)
NADH-ubiquinone oxidoreductase chain H (EC:1.6.5.3) rbh
NADH-quinone oxidoreductase subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01350};; NADH dehydrogenase I subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; NDH-1 subunit
NADH-quinone oxidoreductase subunit H n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GMK3_PUSST rbh
SCNpilot_solid_1_scaffold_3_234
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(246357..248687)
DNA (2331bp) protein (777aa)
NADH-ubiquinone oxidoreductase chain G (EC:1.6.5.3) rbh
NADH-ubiquinone oxidoreductase chain G {ECO:0000313|EMBL:CDM23467.1}; EC=1.6.5.3 {ECO:0000313|EMBL:CDM23467.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; A
NADH dehydrogenase subunit G n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GMK4_PUSST rbh
SCNpilot_solid_1_scaffold_3_235
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(248702..250072)
DNA (1371bp) protein (457aa)
NADH-ubiquinone oxidoreductase chain F (EC:1.6.5.3) rbh
NADH-ubiquinone oxidoreductase chain F {ECO:0000313|EMBL:CDM23466.1}; EC=1.6.5.3 {ECO:0000313|EMBL:CDM23466.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; A
Respiratory-chain NADH dehydrogenase, 51 kDa subunit n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GMK5_PUSST rbh
SCNpilot_solid_1_scaffold_3_236
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(250069..250554)
DNA (486bp) protein (162aa)
NADH-ubiquinone oxidoreductase chain E (EC:1.6.5.3)
NADH-ubiquinone oxidoreductase chain E {ECO:0000313|EMBL:CDM23465.1}; EC=1.6.5.3 {ECO:0000313|EMBL:CDM23465.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; A
NADH dehydrogenase subunit E n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GMK6_PUSST
SCNpilot_solid_1_scaffold_3_237
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(250582..251835)
DNA (1254bp) protein (418aa)
NADH-ubiquinone oxidoreductase chain D (EC:1.6.5.3) rbh
NADH-quinone oxidoreductase subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01358};; NADH dehydrogenase I subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; NDH-1 subunit
NADH-quinone oxidoreductase subunit D n=1 Tax=Alcaligenes faecalis subsp. faecalis NCIB 8687 RepID=J0UVC6_ALCFA rbh
SCNpilot_solid_1_scaffold_3_238
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(251837..252454)
DNA (618bp) protein (206aa)
NADH-ubiquinone oxidoreductase chain C (EC:1.6.5.3) rbh
NADH-quinone oxidoreductase subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01357};; NADH dehydrogenase I subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; NDH-1 subunit
NADH-quinone oxidoreductase subunit C n=1 Tax=Alcaligenes faecalis subsp. faecalis NCIB 8687 RepID=J0B6Q8_ALCFA rbh
SCNpilot_solid_1_scaffold_3_239
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(252539..252982)
DNA (444bp) protein (148aa)
NADH-ubiquinone oxidoreductase chain B (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01356};; NADH dehydrogenase I subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; NDH-1 subunit
NADH-quinone oxidoreductase subunit B n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GMK9_PUSST rbh
Displaying items 211-240 of 445 in total

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