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SCNpilot_solid_1_scaffold_11_37

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(33424..33744)

Top 3 Functional Annotations

Value Algorithm Source
Branched-chain amino acid transport n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21UH9_RHOFD similarity UNIREF
DB: UNIREF100
  • Identity: 58.7
  • Coverage: 104.0
  • Bit_score: 122
  • Evalue 3.10e-25
branched-chain amino acid transport similarity KEGG
DB: KEGG
  • Identity: 76.4
  • Coverage: 106.0
  • Bit_score: 163
  • Evalue 2.60e-38
Branched-chain amino acid transport {ECO:0000313|EMBL:CDM25611.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Caste similarity UNIPROT
DB: UniProtKB
  • Identity: 76.4
  • Coverage: 106.0
  • Bit_score: 163
  • Evalue 1.30e-37

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 321
ATGACCGATACCGGTTACGTCCTGACCGTCATCGGCGTCATGGCCGCCATCACCGCGGGCCTGCGGGCGCTGCCCTTCATCGGCGGGCACTGGCTGCGCCGCCATCCGCTGGTGCACAAGCTGGGCGACACCTTGCCGCTGTCCATCATGGTGCTGCTGCTGGTCGACACCGTGGCCGGCCAGGCGCGCGGCAACCCTTACGGGCCGTGGCAGGAGATCTTCGCCGTGGCGCTCGTCGCGCTGCTGCAGTGGCGCACCCGCCAGACTCTGCTGAGCATCGTCGCCGGGACGGCGGCCTACATGGCGCTGCGCGCGCTGTAG
PROTEIN sequence
Length: 107
MTDTGYVLTVIGVMAAITAGLRALPFIGGHWLRRHPLVHKLGDTLPLSIMVLLLVDTVAGQARGNPYGPWQEIFAVALVALLQWRTRQTLLSIVAGTAAYMALRAL*