ggKbase home page

SCNpilot_solid_1_scaffold_11_46

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(41464..42261)

Top 3 Functional Annotations

Value Algorithm Source
Putative amino-acid ABC transporter, periplasmic amino acid-binding protein n=3 Tax=Bordetella RepID=K0M964_BORPB similarity UNIREF
DB: UNIREF100
  • Identity: 72.7
  • Coverage: 260.0
  • Bit_score: 364
  • Evalue 8.90e-98
  • rbh
ABC-type amino acid transport/signal transduction systems, periplasmic component/domain similarity KEGG
DB: KEGG
  • Identity: 85.6
  • Coverage: 264.0
  • Bit_score: 446
  • Evalue 5.00e-123
  • rbh
ABC-type amino acid transport/signal transduction systems, periplasmic component/domain {ECO:0000313|EMBL:CDM25602.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderia similarity UNIPROT
DB: UniProtKB
  • Identity: 85.6
  • Coverage: 264.0
  • Bit_score: 446
  • Evalue 2.50e-122

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 798
ATGAAAAAACTTTCCGCGCTCGTCCTGGCTTTCGCCCTGCCCCTGCTATCGGCGGCGCCCGCCGCCCAGGCGGCGACCGACGATCTGGCCGCCATCCAGAAGGCCGGCGTCATCCGTATCGGCACCGAGGGCACCTACGCCCCGTTCTCCTTCCACGACCGCAAGGACAACGCGCTGGTCGGTTTTGACGTGGACATCGGCCGCGCCATCGCCAAGCAACTGGGCGTCAAGGCGGAATTCGTCGAGGGCAAATGGGACGGCCTGATCGCCGGGCTGAACGTCAACCGCTACGACGCGGTCATCAACCAGGTCGGCATCACGCCGGAACGCCAGGCCAAGTACGATTTCTCCAAGCCGTACATTTCCTCCGCCGCCGCCCTGATCGTGCGGGACGACAACACCTCGATCCATGCCTTCAAAGACCTGAAGGGCAAGCGCTCGGCCAACACCATCACCAGCAATTTCGGCAAGCTGGCCCAGCAACACGGAGCGGAAGTCGTGCCGGTGCAGGGCTTCAACGACGCCATCGCGCTGCTGACCTCCGGCCGCGTGGACGCCACGGTCAACGACGAACTGTCCTTCCTGGACTTCAAGAAGCAGCAGCCCGCCGCCAAGGTCAAGGTCGTGGCCACGGACACCAGCACGGAATTCAGCCAGTCGGGCGTGCTGCTGCGCAAGGATCAGCCGGCCCTGAAGGCCGCCGTGGACAAGGCGCTGGACGCGATCCGAGCCGACGGCACGTACAAGGCCATCTCGGAACGCTACTTCGGCGCCGACCTGTCTTCCCGGGTGAAGTAG
PROTEIN sequence
Length: 266
MKKLSALVLAFALPLLSAAPAAQAATDDLAAIQKAGVIRIGTEGTYAPFSFHDRKDNALVGFDVDIGRAIAKQLGVKAEFVEGKWDGLIAGLNVNRYDAVINQVGITPERQAKYDFSKPYISSAAALIVRDDNTSIHAFKDLKGKRSANTITSNFGKLAQQHGAEVVPVQGFNDAIALLTSGRVDATVNDELSFLDFKKQQPAAKVKVVATDTSTEFSQSGVLLRKDQPALKAAVDKALDAIRADGTYKAISERYFGADLSSRVK*