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SCNpilot_solid_1_scaffold_28_145

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(146561..146941)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L17 n=4 Tax=Alcaligenes xylosoxydans xylosoxydans RepID=E3HSW9_ACHXA similarity UNIREF
DB: UNIREF100
  • Identity: 89.7
  • Coverage: 126.0
  • Bit_score: 228
  • Evalue 3.60e-57
LSU ribosomal protein L17p similarity KEGG
DB: KEGG
  • Identity: 97.6
  • Coverage: 125.0
  • Bit_score: 242
  • Evalue 6.80e-62
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castel similarity UNIPROT
DB: UniProtKB
  • Identity: 97.6
  • Coverage: 125.0
  • Bit_score: 242
  • Evalue 3.40e-61

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 381
ATGCGTCATCGTAGCGGCCTCCGCAAACTGAACCGTACCAGCAGCCATCGCCTGGCCATGTTCCGCAACATGGCTGTGTCCCTGCTGACCCACGAAGCGATCAAGACCACGCTGCCCAAGGCCAAGGAATTGCGCCGTGTGGTGGAACCCCTGATTACCCTGGGCAAGAACCCCACGCTGGCCAACCGCCGCCTGGCCTTCGCCCGTCTGCGTGACCGCGATGCCGTCACCAAGCTCTTCAACGAGATCGGCCCGCGCTTCGCCGCCCGCAACGGCGGCTACACCCGTGTGCTGAAGATGGGCTTCCGCCAGGGTGACAACGCCCCCATGGCCTACATGGAACTGGTGGATCGTCCCGAGGCCGAAGCCGCCGCCGAATAA
PROTEIN sequence
Length: 127
MRHRSGLRKLNRTSSHRLAMFRNMAVSLLTHEAIKTTLPKAKELRRVVEPLITLGKNPTLANRRLAFARLRDRDAVTKLFNEIGPRFAARNGGYTRVLKMGFRQGDNAPMAYMELVDRPEAEAAAE*