ggKbase home page

SCNpilot_solid_1_scaffold_28_153

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(151410..151850)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L15 n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=RL15_BORPD similarity UNIREF
DB: UNIREF100
  • Identity: 85.6
  • Coverage: 146.0
  • Bit_score: 250
  • Evalue 1.00e-63
LSU ribosomal protein L15p similarity KEGG
DB: KEGG
  • Identity: 93.8
  • Coverage: 146.0
  • Bit_score: 272
  • Evalue 9.30e-71
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castel similarity UNIPROT
DB: UniProtKB
  • Identity: 93.8
  • Coverage: 146.0
  • Bit_score: 272
  • Evalue 4.60e-70

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 441
ATGTCCGTTACTCAACTGAATACGATCGCGCCCGCCGAAGGCGCCAAGCGTCCGCGCCGCCGCGTGGGCCGTGGCATCGGTTCCGGCCTGGGCAAGACGGCCGGCCGCGGCCACAAGGGCCAGAAGTCCCGTGCCGGTGGTTTCCACAAGGTCGGCTTCGAAGGCGGTCAGATGCCGCTGCAGCGTCGCCTGCCCAAGCGCGGCTTCACCCCGCTGGGTCGCCACCTGGCGGCCGAGATCCGTCTGTCCGACCTGCAGGCGCTGCCCGTCGACGAAATCGACGTGCAGGTGCTCAAGGCCGCCGGCCTGGTCGGCGACCTGGTGCGCTACGTCAAGGTCATCAAGACCGGCGAGATCTCCCGCAAGGTTGCCCTGAAGGGCATCAATGCAACGGCCGGCGCCCGCGCCGCGATCGAGGCCGCCGGCGGTTCGCTGGCTTAA
PROTEIN sequence
Length: 147
MSVTQLNTIAPAEGAKRPRRRVGRGIGSGLGKTAGRGHKGQKSRAGGFHKVGFEGGQMPLQRRLPKRGFTPLGRHLAAEIRLSDLQALPVDEIDVQVLKAAGLVGDLVRYVKVIKTGEISRKVALKGINATAGARAAIEAAGGSLA*