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SCNpilot_solid_1_scaffold_28

Search features with annotation key words

Displaying items 151-180 of 186 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_28_150
Alcaligenes sp. EGD-AK7, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(149712..149825)
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=6 Tax=Alcaligenaceae RepID=E8UF59_TAYEM
50S ribosomal protein L36p
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=1386079 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcali
SCNpilot_solid_1_scaffold_28_151
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(149854..150072)
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=1 Tax=Advenella kashmirensis (strain DSM 17095 / LMG 22695 / WT001) RepID=I3UHB0_ADVKW
Translation initiation factor 1
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Ca
SCNpilot_solid_1_scaffold_28_152
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(150078..151400)
DNA (1323bp) protein (441aa)
Protein translocase subunit SecY n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GX23_PUSST rbh
Preprotein translocase secY subunit rbh
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Cast
SCNpilot_solid_1_scaffold_28_153
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(151410..151850)
DNA (441bp) protein (147aa)
50S ribosomal protein L15 n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=RL15_BORPD
LSU ribosomal protein L15p
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castel
SCNpilot_solid_1_scaffold_28_154
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(151865..152050)
DNA (186bp) protein (62aa)
50S ribosomal protein L30 n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GX25_PUSST
LSU ribosomal protein L30p
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00032272}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castel
SCNpilot_solid_1_scaffold_28_155
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(152054..152575)
DNA (522bp) protein (174aa)
30S ribosomal protein S5 n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GX26_PUSST rbh
SSU ribosomal protein S5p rbh
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castell
SCNpilot_solid_1_scaffold_28_156
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(152585..152950)
DNA (366bp) protein (122aa)
50S ribosomal protein L18 n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GX27_PUSST
LSU ribosomal protein L18p
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellanie
SCNpilot_solid_1_scaffold_28_157
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(152972..153505)
DNA (534bp) protein (178aa)
50S ribosomal protein L6 n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GX28_PUSST
LSU ribosomal protein L6p rbh
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castell
SCNpilot_solid_1_scaffold_28_158
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(153520..153915)
DNA (396bp) protein (132aa)
30S ribosomal protein S8 n=1 Tax=Alcaligenes faecalis subsp. faecalis NCIB 8687 RepID=J0UL77_ALCFA
SSU ribosomal protein S8p
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniel
SCNpilot_solid_1_scaffold_28_159
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(153927..154232)
DNA (306bp) protein (102aa)
30S ribosomal protein S14 n=1 Tax=Bordetella sp. FB-8 RepID=UPI00037B58E4
SSU ribosomal protein S14p / SSU ribosomal protein S14p, zinc-independent
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellanie
SCNpilot_solid_1_scaffold_28_160
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(154242..154781)
DNA (540bp) protein (180aa)
50S ribosomal protein L5 n=1 Tax=Alcaligenes faecalis subsp. faecalis NCIB 8687 RepID=J0B5L7_ALCFA rbh
LSU ribosomal protein L5p rbh
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniel
SCNpilot_solid_1_scaffold_28_161
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(154794..155114)
DNA (321bp) protein (107aa)
50S ribosomal protein L24 n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GX32_PUSST
LSU ribosomal protein L24p
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellanie
SCNpilot_solid_1_scaffold_28_162
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(155125..155493)
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=3 Tax=Alcaligenes RepID=J0AXR0_ALCFA
LSU ribosomal protein L14p
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castel
SCNpilot_solid_1_scaffold_28_163
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(155804..157699)
DNA (1896bp) protein (632aa)
Diguanylate cyclase/phosphodiesterase n=1 Tax=Comamonas testosteroni (strain CNB-2) RepID=D0J171_COMT2
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CDM22586.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_28_164
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

157872..158621
DNA (750bp) protein (250aa)
Putative TetR-family regulatory protein n=3 Tax=Bordetella bronchiseptica RepID=K0MVX3_BORBM
Predicted transcriptional regulator for fatty acid degradation FadQ, TetR family rbh
Predicted transcriptional regulator for fatty acid degradation FadQ, TetR family {ECO:0000313|EMBL:CDM22587.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Al
SCNpilot_solid_1_scaffold_28_165
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

158838..160190
DNA (1353bp) protein (451aa)
Aromatic hydrocarbon degradation membrane protein n=2 Tax=Alcaligenes RepID=M5IYC3_9BURK rbh
Long-chain fatty acid transport protein rbh
Long-chain fatty acid transport protein {ECO:0000313|EMBL:CDM22592.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="C
SCNpilot_solid_1_scaffold_28_166
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

160263..160790
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4XG81_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM22593.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_28_167
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

160787..161458
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Achromobacter piechaudii HLE RepID=J4J739_9BURK
putative lipoprotein transmembrane
Putative lipoprotein transmembrane {ECO:0000313|EMBL:CDM22594.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castel
SCNpilot_solid_1_scaffold_28_168
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

161489..163189
DNA (1701bp) protein (567aa)
Long-chain-fatty-acid--CoA ligase (EC:6.2.1.3) rbh
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:CDM22595.1}; EC=6.2.1.3 {ECO:0000313|EMBL:CDM22595.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcali
Acyl-CoA synthetase, long-chain-fatty-acid--CoA ligase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GX37_PUSST rbh
SCNpilot_solid_1_scaffold_28_169
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(163247..163660)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T4K2_ACIDE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM22597.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_28_170
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(163769..165559)
DNA (1791bp) protein (597aa)
Gamma-glutamyltranspeptidase (EC:2.3.2.2) rbh
Gamma-glutamyltranspeptidase {ECO:0000313|EMBL:CDM22596.1}; EC=2.3.2.2 {ECO:0000313|EMBL:CDM22596.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenac
Gamma-glutamyltransferase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TXP7_ALIDB
SCNpilot_solid_1_scaffold_28_171
Advenella mimigardefordensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(165677..167179)
DNA (1503bp) protein (501aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0003686BE8 rbh
putative tripartite tricarboxylate transporter, TctA family
Putative tripartite tricarboxylate transporter, TctA family {ECO:0000313|EMBL:AHG65977.1}; TaxID=1247726 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" sourc
SCNpilot_solid_1_scaffold_28_172
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(167191..167649)
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0003793C9B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEC22224.1}; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusillimonas sp. (s
SCNpilot_solid_1_scaffold_28_173
Cupriavidus sp. HPC(L), Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(167694..168674)
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2GY46_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:ESH95086.1}; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HP
putative Bug-like extra cytoplasmic solute receptor, TTT family
SCNpilot_solid_1_scaffold_28_174
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(168791..169072)
DNA (282bp) protein (94aa)
30S ribosomal protein S17 n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=RS17_BORPD
SSU ribosomal protein S17p
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castel
SCNpilot_solid_1_scaffold_28_175
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(169074..169265)
DNA (192bp) protein (64aa)
50S ribosomal protein L29 n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GX39_PUSST
LSU ribosomal protein L29p
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellanie
SCNpilot_solid_1_scaffold_28_176
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(169277..169693)
DNA (417bp) protein (139aa)
50S ribosomal protein L16 n=2 Tax=Achromobacter piechaudii RepID=D4X5A0_9BURK
LSU ribosomal protein L16p
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castel
SCNpilot_solid_1_scaffold_28_177
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(169696..170487)
DNA (792bp) protein (264aa)
30S ribosomal protein S3 n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GX41_PUSST rbh
SSU ribosomal protein S3p rbh
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniel
SCNpilot_solid_1_scaffold_28_178
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(170497..170826)
DNA (330bp) protein (110aa)
50S ribosomal protein L22 n=1 Tax=Advenella kashmirensis (strain DSM 17095 / LMG 22695 / WT001) RepID=I3UHI3_ADVKW
LSU ribosomal protein L22p
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castel
SCNpilot_solid_1_scaffold_28_179
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(170830..171105)
DNA (276bp) protein (92aa)
30S ribosomal protein S19 n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=RS19_BORPD
SSU ribosomal protein S19p
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellanie
Displaying items 151-180 of 186 in total

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