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SCNpilot_solid_1_scaffold_28_179

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(170830..171105)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S19 n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=RS19_BORPD similarity UNIREF
DB: UNIREF100
  • Identity: 95.6
  • Coverage: 91.0
  • Bit_score: 181
  • Evalue 2.80e-43
SSU ribosomal protein S19p similarity KEGG
DB: KEGG
  • Identity: 97.8
  • Coverage: 91.0
  • Bit_score: 185
  • Evalue 9.40e-45
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellanie similarity UNIPROT
DB: UniProtKB
  • Identity: 97.8
  • Coverage: 91.0
  • Bit_score: 185
  • Evalue 4.70e-44

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 276
ATGTCACGTTCTGTCAAGAAAGGCCCGTTCGTCGATGCGCATCTGATCAAAAAGGTCGATGCCGCCGTCGGGGGCAAAGAAAAGAAGCCGATCAAGACCTGGTCGCGCCGGTCCACCATCCTGCCCGAATTCATCGGGCTGACCATTGCCGTGCACAACGGCCGCCAGCACGTTCCCGTGTACATCAACGAGAACATGGTCGGTCACAAGCTCGGTGAATTTGCCCTGACGCGCACCTTCAAGGGTCACGCGGCGGACAAAAAGGCCAAGAGGTAA
PROTEIN sequence
Length: 92
MSRSVKKGPFVDAHLIKKVDAAVGGKEKKPIKTWSRRSTILPEFIGLTIAVHNGRQHVPVYINENMVGHKLGEFALTRTFKGHAADKKAKR*