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SCNpilot_solid_1_scaffold_28_178

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(170497..170826)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L22 n=1 Tax=Advenella kashmirensis (strain DSM 17095 / LMG 22695 / WT001) RepID=I3UHI3_ADVKW similarity UNIREF
DB: UNIREF100
  • Identity: 96.3
  • Coverage: 109.0
  • Bit_score: 205
  • Evalue 2.90e-50
LSU ribosomal protein L22p similarity KEGG
DB: KEGG
  • Identity: 99.1
  • Coverage: 109.0
  • Bit_score: 208
  • Evalue 9.50e-52
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castel similarity UNIPROT
DB: UniProtKB
  • Identity: 99.1
  • Coverage: 109.0
  • Bit_score: 208
  • Evalue 4.70e-51

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 330
ATGGAAACTACCGCAGTCATTCGCGGCGTTCATATTTCCGCTCAGAAGACCCGCCTGGTGGCGGATCTGATCCGCGGCAAATCCGTGGCGAACGCCCTCAACATCCTGACCTTCAGCCCGAAGAAGGCCGCCGGCATCCTGAAAAAGGCGCTGGAATCGGCCATCGCCAATGCCGAGCACAACGACGGTGCCGACATCGACGAACTGAAAGTCACCACGATCTATGTCGACAAAGCTCAGTCGATGAAGCGTTTCTCGGCCCGTGCGAAGGGCCGTGGCAACCGCATCGAAAAGCAGACCTGCCACATCGTGGTCAAGGTCGGGGCCTAA
PROTEIN sequence
Length: 110
METTAVIRGVHISAQKTRLVADLIRGKSVANALNILTFSPKKAAGILKKALESAIANAEHNDGADIDELKVTTIYVDKAQSMKRFSARAKGRGNRIEKQTCHIVVKVGA*