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SCNpilot_solid_1_scaffold_28

Search features with annotation key words

Displaying items 61-90 of 186 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_28_61
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58508..59182)
DNA (675bp) protein (225aa)
Orotate phosphoribosyltransferase (EC:2.4.2.10) rbh
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=
orotate phosphoribosyltransferase n=1 Tax=Pusillimonas noertemannii RepID=UPI0002DD874C rbh
SCNpilot_solid_1_scaffold_28_62
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59308..60105
DNA (798bp) protein (266aa)
Extradiol ring-cleavage dioxygenase class iii protein subunit b n=1 Tax=Alcaligenes faecalis subsp. faecalis NCIB 8687 RepID=J0UQM3_ALCFA rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CDM26025.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_28_63
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

60122..60913
DNA (792bp) protein (264aa)
Exodeoxyribonuclease III (EC:3.1.11.2) rbh
Exodeoxyribonuclease III {ECO:0000313|EMBL:CDM26026.1}; EC=3.1.11.2 {ECO:0000313|EMBL:CDM26026.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae
Endonuclease n=1 Tax=Alcaligenes faecalis subsp. faecalis NCIB 8687 RepID=J0JGN1_ALCFA rbh
SCNpilot_solid_1_scaffold_28_64
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

60997..61200
DNA (204bp) protein (68aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM26028.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_28_65
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61358..62365)
DNA (1008bp) protein (336aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0003052501 rbh
Sodium/bile acid symporter family rbh
Sodium/bile acid symporter family {ECO:0000313|EMBL:CDM26030.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castell
SCNpilot_solid_1_scaffold_28_66
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(62495..63745)
DNA (1251bp) protein (417aa)
muropeptide transporter, partial n=3 Tax=Bordetella pertussis RepID=UPI00037617C8 rbh
AmpG permease rbh
AmpG permease {ECO:0000313|EMBL:CDM26032.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 6
SCNpilot_solid_1_scaffold_28_67
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(63742..64410)
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002FFB0C3 rbh
Methionine biosynthesis protein MetW rbh
Methionine biosynthesis protein MetW {ECO:0000313|EMBL:CDM26033.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Cast
SCNpilot_solid_1_scaffold_28_68
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(64407..65651)
DNA (1245bp) protein (415aa)
Homoserine O-acetyltransferase (EC:2.3.1.31)
Homoserine O-acetyltransferase {ECO:0000256|HAMAP-Rule:MF_00296, ECO:0000313|EMBL:CDM26034.1}; EC=2.3.1.31 {ECO:0000256|HAMAP-Rule:MF_00296, ECO:0000313|EMBL:CDM26034.1};; Homoserine O-trans-acetylase
Homoserine O-acetyltransferase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GT21_PUSST rbh
SCNpilot_solid_1_scaffold_28_69
Alcaligenes faecalis, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

65923..66225
DNA (303bp) protein (101aa)
LuxR family transcriptional regulator n=1 Tax=Alcaligenes faecalis subsp. faecalis NCIB 8687 RepID=J0UM31_ALCFA
LuxR family transcriptional regulator {ECO:0000313|EMBL:EJC62076.1}; TaxID=1156918 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcali
LuxR family transcriptional regulator
SCNpilot_solid_1_scaffold_28_70
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

66262..67830
DNA (1569bp) protein (523aa)
Glutamate--cysteine ligase (EC:6.3.2.2) rbh
Glutamate--cysteine ligase {ECO:0000256|HAMAP-Rule:MF_00578, ECO:0000256|RuleBase:RU004391}; EC=6.3.2.2 {ECO:0000256|HAMAP-Rule:MF_00578, ECO:0000256|RuleBase:RU004391};; Gamma-ECS {ECO:0000256|HAMAP-
Glutamate--cysteine ligase (Fragment) n=1 Tax=Bordetella avium (strain 197N) RepID=Q2KU62_BORA1
SCNpilot_solid_1_scaffold_28_71
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

67892..69115
DNA (1224bp) protein (408aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BL07 RepID=U8LQW5_PSEAI rbh
Dehydrogenase {ECO:0000313|EMBL:KDM68774.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.
short chain dehydrogenase family protein
SCNpilot_solid_1_scaffold_28_72
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(69122..72364)
DNA (3243bp) protein (1081aa)
UPI0003CEDAA4 related cluster n=1 Tax=unknown RepID=UPI0003CEDAA4 rbh
Transporter {ECO:0000313|EMBL:ESY72056.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.
outer membrane autotransporter barrel domain-containing protein
SCNpilot_solid_1_scaffold_28_73
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(72693..73175)
DNA (483bp) protein (161aa)
AsnC family transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3F6_9GAMM
AsnC family transcriptional regulator {ECO:0000313|EMBL:EIL93997.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="R
transcriptional regulator
SCNpilot_solid_1_scaffold_28_74
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

73262..74152
DNA (891bp) protein (297aa)
Putative permease, DMT superfamily n=1 Tax=Caulobacter sp. AP07 RepID=J2PVW3_9CAUL rbh
Putative permease, DMT superfamily {ECO:0000313|EMBL:EJL31907.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacte
putative permease, DMT superfamily
SCNpilot_solid_1_scaffold_28_75
Burkholderia terrae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

74192..74470
DNA (279bp) protein (93aa)
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI0003829800
Plasmid maintenance system killer protein {ECO:0000313|EMBL:EIM96417.1}; TaxID=1171375 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source=
plasmid maintenance system killer protein
SCNpilot_solid_1_scaffold_28_76
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

74482..74784
DNA (303bp) protein (101aa)
Virulence-associated protein, putative n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GV41_PUSST
virulence-associated protein
Virulence-associated protein, putative {ECO:0000313|EMBL:AEC18683.1}; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusi
SCNpilot_solid_1_scaffold_28_77
unknown

Not on your lists

74864..75481
DNA (618bp) protein (206aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_28_trna_1
unknown

Not on your lists

comp(75503..75574)
DNA (72bp)
transferRNA
SCNpilot_solid_1_scaffold_28_78
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

75781..76692
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GTJ9_PUSST rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEC20963.1}; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusillimonas sp. (s
SCNpilot_solid_1_scaffold_28_79
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

76854..77831
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GTK2_PUSST rbh
2-nitropropane dioxygenase rbh
2-nitropropane dioxygenase {ECO:0000313|EMBL:CDM26041.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella
SCNpilot_solid_1_scaffold_28_80
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

77828..78559
DNA (732bp) protein (244aa)
Enoyl-CoA hydratase (EC:4.2.1.17) rbh
Enoyl-CoA hydratase {ECO:0000313|EMBL:CDM26042.1}; EC=4.2.1.17 {ECO:0000313|EMBL:CDM26042.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Cas
enoyl-CoA hydratase n=2 Tax=Bordetella pertussis RepID=UPI00035C9E4C
SCNpilot_solid_1_scaffold_28_81
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

78772..78999
DNA (228bp) protein (76aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM26043.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_28_82
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(79083..81287)
DNA (2205bp) protein (735aa)
ATP-dependent DNA helicase Rep {ECO:0000256|HAMAP-Rule:MF_01920, ECO:0000313|EMBL:CDM26044.1}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01920, ECO:0000256|SAAS:SAAS00145970};; TaxID=1437824 species="Bac
ATP-dependent DNA helicase Rep n=1 Tax=Bordetella sp. FB-8 RepID=UPI00036A6E43 rbh
ATP-dependent DNA helicase Rep rbh
SCNpilot_solid_1_scaffold_28_83
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(81289..83385)
DNA (2097bp) protein (699aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=1437824 species="Bacteria;
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI000375293C rbh
Helicase PriA rbh
SCNpilot_solid_1_scaffold_28_84
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(83640..84707)
DNA (1068bp) protein (356aa)
Uroporphyrinogen III decarboxylase (EC:4.1.1.37) rbh
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.
uroporphyrinogen decarboxylase n=1 Tax=Pusillimonas noertemannii RepID=UPI0002F16FC4 rbh
SCNpilot_solid_1_scaffold_28_85
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(84709..85563)
DNA (855bp) protein (285aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0003629740
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CDM26058.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_28_86
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

85806..87182
DNA (1377bp) protein (459aa)
Sodium:alanine symporter n=1 Tax=Pseudomonas stutzeri DSM 10701 RepID=I7ADZ3_PSEST rbh
Sodium/glycine symporter GlyP rbh
Sodium/glycine symporter GlyP {ECO:0000313|EMBL:CDM26060.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellanie
SCNpilot_solid_1_scaffold_28_87
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(87235..88260)
DNA (1026bp) protein (342aa)
hypothetical protein n=1 Tax=Pseudomonas sp. 313 RepID=UPI000311D6D3 rbh
Dipeptide transport ATP-binding protein DppF rbh
Dipeptide transport ATP-binding protein DppF {ECO:0000313|EMBL:CDM26063.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" sour
SCNpilot_solid_1_scaffold_28_88
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(88257..89309)
DNA (1053bp) protein (351aa)
Oligopeptide ABC transporter, ATP-binding protein n=1 Tax=Pseudomonas sp. CFII64 RepID=S6J316_9PSED rbh
oligopeptide ABC transporter, ATP-binding protein rbh
Oligopeptide ABC transporter, ATP-binding protein {ECO:0000313|EMBL:CDM26064.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;"
SCNpilot_solid_1_scaffold_28_89
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(89306..90139)
DNA (834bp) protein (278aa)
Cytochrome C550 n=1 Tax=Advenella kashmirensis W13003 RepID=V8QMC9_9BURK rbh
Dipeptide transport system permease protein DppC rbh
Dipeptide transport system permease protein DppC {ECO:0000313|EMBL:CDM26065.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;"
Displaying items 61-90 of 186 in total

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