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SCNpilot_solid_1_scaffold_28

Search features with annotation key words

Displaying items 1-30 of 186 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_28_1
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(3..143)
DNA (141bp) protein (47aa)
50S ribosomal protein L13 n=2 Tax=Bordetella holmesii RepID=M5NK18_9BORD
LSU ribosomal protein L13p
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|SAAS:SAAS00083943}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castel
SCNpilot_solid_1_scaffold_28_2
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(409..1509)
DNA (1101bp) protein (367aa)
Putative exported solute-binding protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GRZ0_PUSST rbh
TRAP transporter solute receptor rbh
TRAP transporter solute receptor {ECO:0000313|EMBL:CDM25966.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castella
SCNpilot_solid_1_scaffold_28_3
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1613..2980)
DNA (1368bp) protein (456aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GRY9_PUSST rbh
TldE protein, part of TldE/TldD proteolytic complex rbh
TldE protein, part of TldE/TldD proteolytic complex {ECO:0000313|EMBL:CDM25967.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.
SCNpilot_solid_1_scaffold_28_4
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3033..3614
DNA (582bp) protein (194aa)
UPF0307 protein KYC_13793 n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0F7L1_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM25968.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_28_5
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3589..4281
DNA (693bp) protein (231aa)
Carboxylesterase n=1 Tax=Alcaligenes sp. EGD-AK7 RepID=U7U7Z2_9BURK
phospholipase/carboxylesterase family protein rbh
Phospholipase/carboxylesterase family protein {ECO:0000313|EMBL:CDM25969.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" sou
SCNpilot_solid_1_scaffold_28_6
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4405..6915)
DNA (2511bp) protein (837aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GRY6_PUSST rbh
Acetyl-CoA synthetase (ADP-forming) alpha and beta chains, putative rbh
Acetyl-CoA synthetase (ADP-forming) alpha and beta chains, putative {ECO:0000313|EMBL:CDM25970.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae;
SCNpilot_solid_1_scaffold_28_7
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6977..8398
DNA (1422bp) protein (474aa)
Glutamyl-tRNA synthetase (EC:6.1.1.17) rbh
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022, ECO:0000313|EMBL:CDM25971.1};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID
Glutamate--tRNA ligase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GRY5_PUSST rbh
SCNpilot_solid_1_scaffold_28_8
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8408..8896)
DNA (489bp) protein (163aa)
Putative lipoprotein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GRY4_PUSST
putative lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:CDM25972.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defra
SCNpilot_solid_1_scaffold_28_9
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9032..9466
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI000315517C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM25973.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_28_10
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9700..10464
DNA (765bp) protein (255aa)
hypothetical protein n=1 Tax=Methyloversatilis universalis RepID=UPI000379E177
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFC64294.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
SCNpilot_solid_1_scaffold_28_11
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10569..11135
DNA (567bp) protein (189aa)
Putative integral membrane protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GRX7_PUSST
Integral membrane protein YggT rbh
Integral membrane protein YggT {ECO:0000313|EMBL:CDM25975.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellani
SCNpilot_solid_1_scaffold_28_12
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11145..11642)
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002F0303D
Outer membrane lipoprotein
Outer membrane lipoprotein {ECO:0000313|EMBL:CDM25976.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella
SCNpilot_solid_1_scaffold_28_13
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11674..12624)
DNA (951bp) protein (317aa)
sugar kinase n=1 Tax=Pusillimonas noertemannii RepID=UPI00036E6A66 rbh
Sugar kinases, ribokinase family rbh
Sugar kinases, ribokinase family {ECO:0000313|EMBL:CDM25977.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castella
SCNpilot_solid_1_scaffold_28_14
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12638..13621)
DNA (984bp) protein (328aa)
Putative membrane protein n=1 Tax=Bordetella avium (strain 197N) RepID=Q2KUW1_BORA1
putative CheA signal transduction histidine kinase
Putative CheA signal transduction histidine kinase {ECO:0000313|EMBL:CDM25978.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;
SCNpilot_solid_1_scaffold_28_15
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13640..14554)
DNA (915bp) protein (305aa)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_0073
ribosomal protein L11 methyltransferase n=1 Tax=Pusillimonas noertemannii RepID=UPI00031E79DC rbh
Ribosomal protein L11 methyltransferase rbh
SCNpilot_solid_1_scaffold_28_16
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14564..15910)
DNA (1347bp) protein (449aa)
Biotin carboxylase of acetyl-CoA carboxylase (EC:6.3.4.14) rbh
Biotin carboxylase of acetyl-CoA carboxylase {ECO:0000313|EMBL:CDM25980.1}; EC=6.3.4.14 {ECO:0000313|EMBL:CDM25980.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderi
Acetyl-CoA carboxylase biotin carboxylase subunit n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GRX2_PUSST rbh
SCNpilot_solid_1_scaffold_28_17
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15914..16354)
DNA (441bp) protein (147aa)
Acetyl-CoA carboxylase biotin carboxyl carrier protein subunit n=1 Tax=Bordetella holmesii F627 RepID=M5NN24_9BORD
Biotin carboxyl carrier protein of acetyl-CoA carboxylase
Biotin carboxyl carrier protein of acetyl-CoA carboxylase {ECO:0000313|EMBL:CDM25981.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellan
SCNpilot_solid_1_scaffold_28_18
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16620..17054)
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI00030A13BB
Cytochrome c-type biogenesis protein ResA
Cytochrome c-type biogenesis protein ResA {ECO:0000313|EMBL:CDM25982.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source=
SCNpilot_solid_1_scaffold_28_19
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17194..18603
DNA (1410bp) protein (470aa)
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4X730_9BURK rbh
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase rbh
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase {ECO:0000313|EMBL:CDM25983.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcalige
SCNpilot_solid_1_scaffold_28_20
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18619..20499
DNA (1881bp) protein (627aa)
Exoribonuclease II {ECO:0000313|EMBL:CDM25984.1}; EC=3.1.13.1 {ECO:0000313|EMBL:CDM25984.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Cast
Exoribonuclease II (EC:3.1.13.1) rbh
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GRW6_PUSST rbh
SCNpilot_solid_1_scaffold_28_21
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20505..21398
DNA (894bp) protein (298aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI000314174F rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CDM25985.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_28_22
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21395..22099
DNA (705bp) protein (235aa)
Monofunctional biosynthetic peptidoglycan transglycosylase {ECO:0000256|HAMAP-Rule:MF_00766, ECO:0000256|SAAS:SAAS00055690}; Short=Monofunctional TGase {ECO:0000256|HAMAP-Rule:MF_00766};; EC=2.4.2.- {
Monofunctional biosynthetic peptidoglycan transglycosylase n=20 Tax=Bordetella RepID=V8U798_BORPT rbh
Monofunctional biosynthetic peptidoglycan transglycosylase rbh
SCNpilot_solid_1_scaffold_28_23
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22155..23330
DNA (1176bp) protein (392aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0003623604 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CDM25987.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_28_24
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23327..24145
DNA (819bp) protein (273aa)
Bis(5'-nucleosyl)-tetraphosphatase, symmetrical (EC:3.6.1.41)
Bis(5'-nucleosyl)-tetraphosphatase, symmetrical {ECO:0000256|SAAS:SAAS00088338, ECO:0000313|EMBL:CDM25988.1}; EC=3.6.1.41 {ECO:0000256|SAAS:SAAS00088330, ECO:0000313|EMBL:CDM25988.1};; TaxID=1437824 s
Diadenosine tetraphosphatase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GRW1_PUSST rbh
SCNpilot_solid_1_scaffold_28_25
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24142..24885)
DNA (744bp) protein (248aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase (EC:2.3.1.51) rbh
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000256|RuleBase:RU361267, ECO:0000313|EMBL:CDM25989.1}; EC=2.3.1.51 {ECO:0000256|RuleBase:RU361267, ECO:0000313|EMBL:CDM25989.1};; TaxID=1437824 sp
Phospholipid/glycerol acyltransferase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GRW0_PUSST
SCNpilot_solid_1_scaffold_28_26
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24947..25390)
DNA (444bp) protein (148aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=1437824 speci
Holliday junction resolvase n=1 Tax=Advenella kashmirensis W13003 RepID=V8QNY9_9BURK
Putative Holliday junction resolvase YggF
SCNpilot_solid_1_scaffold_28_27
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25383..25979)
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI000308F9DC rbh
hypothetical protein rbh
UPF0301 protein BN940_17801 {ECO:0000256|HAMAP-Rule:MF_00758}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellan
SCNpilot_solid_1_scaffold_28_28
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26024..26188)
DNA (165bp) protein (55aa)
Rubredoxin n=48 Tax=Alcaligenaceae RepID=A9I1S4_BORPD
Rubredoxin
Rubredoxin {ECO:0000256|PIRNR:PIRNR000071, ECO:0000313|EMBL:CDM25992.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source=
SCNpilot_solid_1_scaffold_28_29
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26302..27111
DNA (810bp) protein (270aa)
Phosphomethylpyrimidine kinase (EC:2.7.4.7) rbh
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:CDM25993.1}; EC=2.7.4.7 {ECO:0000313|EMBL:CDM25993.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligen
Phosphomethylpyrimidine kinase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GRV7_PUSST
SCNpilot_solid_1_scaffold_28_30
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27108..27749
DNA (642bp) protein (214aa)
Thiamin-phosphate pyrophosphorylase (EC:2.5.1.3) rbh
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI00031A05EA
Displaying items 1-30 of 186 in total

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