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SCNpilot_solid_1_scaffold_28_158

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(153520..153915)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S8 n=1 Tax=Alcaligenes faecalis subsp. faecalis NCIB 8687 RepID=J0UL77_ALCFA similarity UNIREF
DB: UNIREF100
  • Identity: 92.4
  • Coverage: 131.0
  • Bit_score: 240
  • Evalue 1.30e-60
SSU ribosomal protein S8p similarity KEGG
DB: KEGG
  • Identity: 95.4
  • Coverage: 131.0
  • Bit_score: 246
  • Evalue 4.90e-63
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniel similarity UNIPROT
DB: UniProtKB
  • Identity: 95.4
  • Coverage: 131.0
  • Bit_score: 246
  • Evalue 2.40e-62

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 396
ATGAGCATGAGCGATCCCATCGCCGATATGCTGACCCGCGTGCGTAATGCGCAAATGGTCAACAAGACGTCGGTTTCCATGCCCTCCTCGAAGCTGAAGGCTGCCATCGCAGCCGTGCTGAAGGACGAAGGCTACATCGAAGATTTCCGCGTGGCGGGCGAACAGGCCAAGCCGCAGCTGGAAATCACGCTGAAATATTATGCCGGCCGCCCGGTGATCGAGCGCATCGACCGCGTCTCGCGTCCCGGCCTGCGTATCTACAAGAGCAGCGCCACCATCCCTCAGGTCATGAACGGCCTGGGCGTGGCGATCGTCTCCACCCCGCGTGGCGTCATGACGGACCGCAAGGCCCGCGCGACCGGCGTGGGCGGCGAAGTGCTCTGCTACGTGGCATAA
PROTEIN sequence
Length: 132
MSMSDPIADMLTRVRNAQMVNKTSVSMPSSKLKAAIAAVLKDEGYIEDFRVAGEQAKPQLEITLKYYAGRPVIERIDRVSRPGLRIYKSSATIPQVMNGLGVAIVSTPRGVMTDRKARATGVGGEVLCYVA*