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SCNpilot_solid_1_scaffold_28_160

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(154242..154781)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L5 n=1 Tax=Alcaligenes faecalis subsp. faecalis NCIB 8687 RepID=J0B5L7_ALCFA similarity UNIREF
DB: UNIREF100
  • Identity: 90.5
  • Coverage: 179.0
  • Bit_score: 327
  • Evalue 6.20e-87
  • rbh
LSU ribosomal protein L5p similarity KEGG
DB: KEGG
  • Identity: 95.0
  • Coverage: 179.0
  • Bit_score: 342
  • Evalue 6.90e-92
  • rbh
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniel similarity UNIPROT
DB: UniProtKB
  • Identity: 95.0
  • Coverage: 179.0
  • Bit_score: 342
  • Evalue 3.40e-91

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 540
ATGGCTCGTTTACAAGATTTCTACCGCTCCAAGGTCGCTGGCGATCTGAAGGAGAAGTTCGGCTATCAGTCGATCATGCAGGTGCCGCGCATCACCAAGATCACCTTGAACATGGGTGTGTCCGAAGCGGTCTCCGACAAGAAGATCATCGAAAACGCCGTGGGCGACATGACCAAGATCTCCGGTCAGAAGCCCGTCGTCACGAAGACCCGCAAGGCCATCGCCGGCTTCAAGATTCGTGAAGACTACCCGATCGGCTGCATGGTCACCCTGCGTGGCCAGCGCATGTACGAATTCCTGGATCGTCTGATCTCCGTCGCCCTGCCGCGCGTGCGCGACTTCCGCGGCGTGTCGGGCCGTGCCTTCGATGGCCGCGGCAACTACAACATCGGGGTGAAGGAACAGATCATCTTCCCGGAAATCGAATACGACAAGATCGATGCCGTGCGCGGGATGAACATCAGCATCACCACCACCGCAAAGACCGACGAGGAAGCCAAGGCGCTCTTGAGCGCATTCAGCTTCCCCTTCCGCAACTAA
PROTEIN sequence
Length: 180
MARLQDFYRSKVAGDLKEKFGYQSIMQVPRITKITLNMGVSEAVSDKKIIENAVGDMTKISGQKPVVTKTRKAIAGFKIREDYPIGCMVTLRGQRMYEFLDRLISVALPRVRDFRGVSGRAFDGRGNYNIGVKEQIIFPEIEYDKIDAVRGMNISITTTAKTDEEAKALLSAFSFPFRN*