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SCNpilot_solid_1_scaffold_28_156

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(152585..152950)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L18 n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GX27_PUSST similarity UNIREF
DB: UNIREF100
  • Identity: 89.3
  • Coverage: 121.0
  • Bit_score: 213
  • Evalue 1.50e-52
LSU ribosomal protein L18p similarity KEGG
DB: KEGG
  • Identity: 98.3
  • Coverage: 121.0
  • Bit_score: 229
  • Evalue 4.40e-58
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellanie similarity UNIPROT
DB: UniProtKB
  • Identity: 98.3
  • Coverage: 121.0
  • Bit_score: 229
  • Evalue 2.20e-57

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 366
ATGGACAAGAAACTCTCCCGTTTGCGTCGTGCCGCGGCCACCCGCCGCAAGATTCACGAACTGCGCGTGCACCGTCTGTCGGTGCATCGCACGAATCTGCACATCTACGCCAACATCATTTCGCCGGAAGGCGATCGTGTGCTCGTCAGCGCTTCCACGCTCGAGCCCGAAGTCCGCAAGGAACTCGCCAGCCAGAAGGCCAACGGCGGCAATGCCGCCGCCGCCAGCCTGGTCGGCAAGCGCGTGGCCGAGAAGGCCAAGGCTGCCGGCATCGAACTCGTCGCTTTCGACCGTTCGGGCTTCCGTTACCATGGCCGCGTCAAGGCGCTGGCCGAAGCCGCGCGTGAAGCCGGCTTGAAGTTCTAA
PROTEIN sequence
Length: 122
MDKKLSRLRRAAATRRKIHELRVHRLSVHRTNLHIYANIISPEGDRVLVSASTLEPEVRKELASQKANGGNAAAASLVGKRVAEKAKAAGIELVAFDRSGFRYHGRVKALAEAAREAGLKF*