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SCNpilot_solid_1_scaffold_31_3

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(1322..2314)

Top 3 Functional Annotations

Value Algorithm Source
Tripartite ATP-independent periplasmic transporter solute receptor, DctP family n=1 Tax=Herbaspirillum sp. CF444 RepID=J2UMI6_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 63.3
  • Coverage: 330.0
  • Bit_score: 431
  • Evalue 7.40e-118
TRAP-type C4-dicarboxylate transport system, periplasmic component similarity KEGG
DB: KEGG
  • Identity: 72.3
  • Coverage: 328.0
  • Bit_score: 482
  • Evalue 7.90e-134
  • rbh
TRAP-type C4-dicarboxylate transport system, periplasmic component {ECO:0000313|EMBL:CDM25673.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; similarity UNIPROT
DB: UniProtKB
  • Identity: 72.3
  • Coverage: 328.0
  • Bit_score: 482
  • Evalue 3.90e-133

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 993
ATGAAGTTGCTCGCCATCCTGTTCGCCTGCGCGCTGACGTGCTCCCAAGCGGCAATCGCGCAGCAGGAGCCCATCCTGATCAGGTTCAGCCACGTGGTCGCCTCGGACACGCCCAAGGGCAAGGCCGCGGAGCGCTTCCGCCAGCTGGCCGAGCAGGCCACGGGGGGCCGTGTTCGCGTGCAGATCTATCCCAACAGCCAGCTGTACCGCGACCGAGAGGAACTGGAAGCGCTGCAGCTGGGCGCCGTCGAGATGATCGCGCCGTCCCTGTCCAAGCTCGGGCCGCTGGGCGCGCGCGAATTCCAGGTCTTCGATCTGCCCTTCATGTTTCCCGACCGGGCGGCATTGCACCGGGTCACGAACGGTCCTATCGGCGAGGGCATGCTGCAGCGGCTGCGGCTCAAGGGCGTCATCGGCCTGGCTTTCTGGGATAACGGTTTCAAGTCCTTTTCCGCCAACCGCCCCTTGCTCTCGCCCGCCGACATGGTCGGCCTGCGGATGCGCATTCAGCCCTCCAGGGTGCTGGACGCGCAGATGAGGGCGCTGGGCGCCCAGCCCATGACCCTGCAGTTCGGCGAGGTCCACGACGCGCTGGAGGCCGGCGTGGTGGACGGCACGGAGAATCCGCCCTCCAATTTCTACACGCAGGGCATGCAGGAGGTGCAGTCGCACTTCACCGTGTCCAATCATGGCTACCTGGGGTATGCCGTGATCGTCAACAGGAAATTCTGGGAAGGCCTGCCTCCCGACGTGCGCCGGCAGCTCGAGGGCGCGATGCGGGAAGCGACGAGCTATGCCAATTCGATTGCGCAGGAAGAAAACGACCGGGCCCTGGCGGCGATCCGCGCGTCCGGCAAGACGCAGGTCCACGTGCTGACGGAGCCCGAGCGCGAGGCCTGGAAGAAGGCCCTGGCGTCCGTCGGCGTCGACATGGAGGCCCACATCGGCGCAGACCTGATTTCCGACATCCGGCGAGCGATCGCGGCCCCCTGA
PROTEIN sequence
Length: 331
MKLLAILFACALTCSQAAIAQQEPILIRFSHVVASDTPKGKAAERFRQLAEQATGGRVRVQIYPNSQLYRDREELEALQLGAVEMIAPSLSKLGPLGAREFQVFDLPFMFPDRAALHRVTNGPIGEGMLQRLRLKGVIGLAFWDNGFKSFSANRPLLSPADMVGLRMRIQPSRVLDAQMRALGAQPMTLQFGEVHDALEAGVVDGTENPPSNFYTQGMQEVQSHFTVSNHGYLGYAVIVNRKFWEGLPPDVRRQLEGAMREATSYANSIAQEENDRALAAIRASGKTQVHVLTEPEREAWKKALASVGVDMEAHIGADLISDIRRAIAAP*