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SCNpilot_solid_1_scaffold_31

Search features with annotation key words

Displaying items 1-30 of 153 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_31_1
unknown

Not on your lists

comp(2..97)
DNA (96bp) protein (32aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_31_2
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(246..1250)
DNA (1005bp) protein (335aa)
TRAP dicarboxylate transporter, DctP subunit n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GQ24_PUSST
TRAP dicarboxylate transporter subunit DctP
TRAP dicarboxylate transporter, DctP subunit {ECO:0000313|EMBL:AEC19347.1}; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source
SCNpilot_solid_1_scaffold_31_3
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1322..2314)
DNA (993bp) protein (331aa)
Tripartite ATP-independent periplasmic transporter solute receptor, DctP family n=1 Tax=Herbaspirillum sp. CF444 RepID=J2UMI6_9BURK
TRAP-type C4-dicarboxylate transport system, periplasmic component rbh
TRAP-type C4-dicarboxylate transport system, periplasmic component {ECO:0000313|EMBL:CDM25673.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae;
SCNpilot_solid_1_scaffold_31_4
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2528..4540
DNA (2013bp) protein (671aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Ca
Putative C4-dicarboxylate sensor protein DctS n=2 Tax=Herminiimonas arsenicoxydans RepID=A4G295_HERAR rbh
two-component hybrid sensor and regulator rbh
SCNpilot_solid_1_scaffold_31_5
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4593..5183
DNA (591bp) protein (197aa)
Putative C4-dicarboxylate transport transcriptional regulatory protein dctR n=1 Tax=Oxalobacteraceae bacterium IMCC9480 RepID=F1VYR1_9BURK
two-component response regulator rbh
Two-component response regulator {ECO:0000313|EMBL:CDM25671.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castella
SCNpilot_solid_1_scaffold_31_6
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5247..5600)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9ISH1_BORPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAP43301.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (str
SCNpilot_solid_1_scaffold_31_7
Alcaligenes sp. EGD-AK7, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5751..6752)
DNA (1002bp) protein (334aa)
Membrane protein n=1 Tax=Alcaligenes sp. EGD-AK7 RepID=U7UA64_9BURK rbh
Membrane protein {ECO:0000313|EMBL:ERT55393.1}; TaxID=1386079 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes sp. EGD-AK7.;"
basic membrane lipoprotein
SCNpilot_solid_1_scaffold_31_8
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6922..7788)
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GVJ5_PUSST
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CDM24322.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_31_9
Ralstonia sp. GA3-3, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7971..8645)
DNA (675bp) protein (225aa)
GntR family transcriptional regulator n=1 Tax=Ralstonia sp. GA3-3 RepID=R7XHF9_9RALS
GntR family transcriptional regulator {ECO:0000313|EMBL:EON18729.1}; TaxID=1229514 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralsto
GntR family transcriptional regulator
SCNpilot_solid_1_scaffold_31_10
Aminomonas paucivorans, Aminomonas, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(8712..10004)
DNA (1293bp) protein (431aa)
TRAP dicarboxylate transporter, DctM subunit n=1 Tax=Aminomonas paucivorans DSM 12260 RepID=E3CXR0_9BACT
TRAP dicarboxylate transporter, DctM subunit {ECO:0000313|EMBL:EFQ22653.1}; TaxID=584708 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminomonas.;" source="Aminomonas
C4-dicarboxylate transporter permease large protein
SCNpilot_solid_1_scaffold_31_11
Burkholderia sp. BT03, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10007..10483)
DNA (477bp) protein (159aa)
ABC transporter permease n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI000377A994
dctM; C4-dicarboxylate transport system permease, large subunit
TRAP dicarboxylate transporter, DctM subunit {ECO:0000313|EMBL:EUC20293.1}; TaxID=1144309 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" sour
SCNpilot_solid_1_scaffold_31_12
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10480..11502)
DNA (1023bp) protein (341aa)
TRAP dicarboxylate transporter, DctP subunit n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CPA6_DESK7
TRAP dicarboxylate transporter subunit DctP
TRAP dicarboxylate transporter, DctP subunit {ECO:0000313|EMBL:AEG14197.1}; Flags: Precursor;; TaxID=760568 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;
SCNpilot_solid_1_scaffold_31_13
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11572..12369)
DNA (798bp) protein (266aa)
Beta-lactamase domain-containing protein n=1 Tax=Burkholderia glumae (strain BGR1) RepID=C5A7Z8_BURGB
Uncharacterized protein {ECO:0000313|EMBL:CDJ99071.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
beta-lactamase domain protein
SCNpilot_solid_1_scaffold_31_14
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12356..12775)
DNA (420bp) protein (140aa)
carboxymuconolactone decarboxylase (EC:4.1.1.44)
Carboxymuconolactone decarboxylase n=1 Tax=Ralstonia sp. GA3-3 RepID=R7XHD8_9RALS
Carboxymuconolactone decarboxylase {ECO:0000313|EMBL:KGY29003.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligen
SCNpilot_solid_1_scaffold_31_15
Achromobacter sp. RTa, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12765..14393)
DNA (1629bp) protein (543aa)
Glucose-methanol-choline oxidoreductase n=1 Tax=Ralstonia sp. PBA RepID=I9BTU0_9RALS rbh
Uncharacterized protein {ECO:0000313|EMBL:KGD90069.1}; TaxID=1532557 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp.
glucose-methanol-choline oxidoreductase
SCNpilot_solid_1_scaffold_31_16
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14400..16091)
DNA (1692bp) protein (564aa)
sulfoacetaldehyde acetyltransferase (EC:2.2.1.6)
Sulfoacetaldehyde acetyltransferase n=1 Tax=Ralstonia sp. PBA RepID=I9W4E3_9RALS rbh
Sulfoacetaldehyde acetyltransferase {ECO:0000313|EMBL:KGY26875.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcalige
SCNpilot_solid_1_scaffold_31_17
Cellvibrio japonicus, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16406..18589)
DNA (2184bp) protein (728aa)
Putative signaling protein n=1 Tax=Cellvibrio japonicus (strain Ueda107) RepID=B3PE43_CELJU rbh
putative signaling protein
Putative signaling protein {ECO:0000313|EMBL:ACE86075.1}; TaxID=498211 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Cellvibrio.;" source="Cellvibrio japon
SCNpilot_solid_1_scaffold_31_18
Burkholderia pyrrocinia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19094..19663)
DNA (570bp) protein (190aa)
heat shock protein Hsp20 n=1 Tax=Burkholderia sp. WSM4176 RepID=UPI00037D1204
Heat-shock protein Hsp20 {ECO:0000313|EMBL:KFL49366.1}; TaxID=60550 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex
heat shock protein Hsp20
SCNpilot_solid_1_scaffold_31_19
Burkholderia jiangsuensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19783..20190)
DNA (408bp) protein (136aa)
heat-shock protein n=1 Tax=Burkholderia sp. WSM4176 RepID=UPI00036F3693
Heat-shock protein {ECO:0000313|EMBL:KAK42383.1}; TaxID=1458357 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia jiangsuen
heat shock protein Hsp20
SCNpilot_solid_1_scaffold_31_20
Burkholderia sp. SJ98, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20218..20658)
DNA (441bp) protein (147aa)
Heat shock protein Hsp20 n=1 Tax=Burkholderia sp. SJ98 RepID=K8RBI3_9BURK
Heat shock protein Hsp20 {ECO:0000313|EMBL:EKS71460.1}; TaxID=406819 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp.
heat shock protein Hsp20
SCNpilot_solid_1_scaffold_31_21
Burkholderia glumae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20956..22575)
DNA (1620bp) protein (540aa)
molecular chaperone GroEL n=1 Tax=Pusillimonas noertemannii RepID=UPI0002EA0449 rbh
chaperonin GroEL
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=626418 speci
SCNpilot_solid_1_scaffold_31_22
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22608..22922)
DNA (315bp) protein (105aa)
molecular chaperone GroES n=1 Tax=Pusillimonas noertemannii RepID=UPI0002E56615
Heat shock protein 60 family co-chaperone GroES
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=1437824 spec
SCNpilot_solid_1_scaffold_31_23
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23090..23725)
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI00036E7CDD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM23682.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_31_trna_2
unknown

Not on your lists

comp(24298..24371)
DNA (74bp)
transferRNA
SCNpilot_solid_1_scaffold_31_24
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24474..26318)
DNA (1845bp) protein (615aa)
diguanylate cyclase n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI0003767E8F rbh
diguanylate cyclase/phosphodiesterase rbh
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:CDM24278.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Cas
SCNpilot_solid_1_scaffold_31_25
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26419..26976)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GTZ3_PUSST rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CDM24277.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_31_26
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27001..27453)
DNA (453bp) protein (151aa)
[Fe-S] cluster formation/repair protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GTZ4_PUSST
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM24276.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_31_27
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27457..28740)
DNA (1284bp) protein (428aa)
Cysteine desulfurase (EC:2.8.1.7) rbh
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216};; TaxID=1437824 species="Bacteria; Proteo
Cysteine desulfurase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GTZ5_PUSST
SCNpilot_solid_1_scaffold_31_28
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28737..30044)
DNA (1308bp) protein (436aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GTZ6_PUSST rbh
Iron-sulfur cluster assembly protein SufD rbh
Iron-sulfur cluster assembly protein SufD {ECO:0000313|EMBL:CDM24274.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source=
SCNpilot_solid_1_scaffold_31_29
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30041..30865)
DNA (825bp) protein (275aa)
Branched-chain amino acid ABC transporter ATP-binding protein n=1 Tax=Alcaligenes faecalis subsp. faecalis NCIB 8687 RepID=J0B941_ALCFA
Iron-sulfur cluster assembly ATPase protein SufC rbh
Iron-sulfur cluster assembly ATPase protein SufC {ECO:0000313|EMBL:CDM24273.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;"
Displaying items 1-30 of 153 in total

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