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SCNpilot_solid_1_scaffold_31

Search features with annotation key words

Displaying items 61-90 of 153 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_31_59
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(59972..60655)
DNA (684bp) protein (228aa)
DNA-3-methyladenine glycosylase (EC:3.2.2.20)
Uncharacterized protein n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6YY09_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:ENO84814.1}; TaxID=1123367 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera linaloolentis 47Lo
SCNpilot_solid_1_scaffold_31_60
Achromobacter arsenitoxydans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60701..62425)
DNA (1725bp) protein (575aa)
ldcA; muramoyltetrapeptide carboxypeptidase (EC:3.4.17.13) rbh
Muramoyltetrapeptide carboxypeptidase n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0F3L7_9BURK rbh
Muramoyltetrapeptide carboxypeptidase {ECO:0000313|EMBL:EHK67072.1}; TaxID=477184 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achro
SCNpilot_solid_1_scaffold_31_61
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(62418..63266)
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IP63_BORPD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CDM24203.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_31_62
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(63270..64763)
DNA (1494bp) protein (498aa)
Uncharacterized protein n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z815_AZOL4 rbh
NAD(P)HX epimerase / NAD(P)HX dehydratase
Uncharacterized protein {ECO:0000313|EMBL:CBS87123.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum li
SCNpilot_solid_1_scaffold_31_63
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(64817..66778)
DNA (1962bp) protein (654aa)
Exodeoxyribonuclease V alpha chain (EC:3.1.11.5) rbh
RecBCD enzyme subunit RecD {ECO:0000256|HAMAP-Rule:MF_01487}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01487, ECO:0000313|EMBL:CDM24200.1};; Exonuclease V subunit RecD {ECO:0000256|HAMAP-Rule:MF_01487};
Exodeoxyribonuclease V, alpha subunit n=1 Tax=Thiocapsa marina 5811 RepID=F9UF31_9GAMM
SCNpilot_solid_1_scaffold_31_64
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(66771..70433)
DNA (3663bp) protein (1221aa)
RecBCD enzyme subunit RecB {ECO:0000256|HAMAP-Rule:MF_01485}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01485, ECO:0000313|EMBL:CDM24199.1};; Exonuclease V subunit RecB {ECO:0000256|HAMAP-Rule:MF_01485};
Exodeoxyribonuclease V beta chain (EC:3.1.11.5) rbh
Exodeoxyribonuclease V, beta subunit n=1 Tax=Thiocapsa marina 5811 RepID=F9UF30_9GAMM
SCNpilot_solid_1_scaffold_31_65
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(70430..74002)
DNA (3573bp) protein (1191aa)
RecBCD enzyme subunit RecC {ECO:0000256|HAMAP-Rule:MF_01486}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01486, ECO:0000313|EMBL:CDM24198.1};; Exonuclease V subunit RecC {ECO:0000256|HAMAP-Rule:MF_01486};
Exodeoxyribonuclease V gamma chain (EC:3.1.11.5) rbh
DNA helicase/exodeoxyribonuclease V, gamma subunit n=1 Tax=Burkholderia vietnamiensis (strain G4 / LMG 22486) RepID=A4JS85_BURVG rbh
SCNpilot_solid_1_scaffold_31_66
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

74132..74917
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IS00_BORPD
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CDM24197.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_31_67
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

75100..75597
DNA (498bp) protein (166aa)
Lipoprotein signal peptidase n=1 Tax=Ralstonia sp. PBA RepID=I9W4C1_9RALS
probable lipoprotein signal peptide
Probable lipoprotein signal peptide {ECO:0000313|EMBL:CDM24195.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Caste
SCNpilot_solid_1_scaffold_31_68
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(75661..76224)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GN00_PUSST
Cell wall-associated hydrolases
Cell wall-associated hydrolases {ECO:0000313|EMBL:CDM24196.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellan
SCNpilot_solid_1_scaffold_31_69
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

76277..76984
DNA (708bp) protein (236aa)
FIG135464: Cytochrome c4 n=1 Tax=Achromobacter xylosoxidans NH44784-1996 RepID=R4XV77_ALCXX
FIG135464: Cytochrome c4
FIG135464: Cytochrome c4 {ECO:0000313|EMBL:CCH08469.1}; TaxID=1167634 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xyl
SCNpilot_solid_1_scaffold_31_70
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

76981..77913
DNA (933bp) protein (311aa)
Cytochrome c family protein 8 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HHY3_ACHXA rbh
cytochrome C rbh
Cytochrome c family protein 8 {ECO:0000313|EMBL:ADP16683.1}; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter
SCNpilot_solid_1_scaffold_31_71
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(77961..78644)
DNA (684bp) protein (228aa)
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI00035CA23F
Response regulator BaeR
Response regulator BaeR {ECO:0000313|EMBL:CDM24194.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_31_72
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(78641..80035)
DNA (1395bp) protein (465aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Ca
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Pseudogulbenkiania ferrooxidans 2002 RepID=B9Z8P1_9NEIS rbh
Sensory histidine kinase BaeS rbh
SCNpilot_solid_1_scaffold_31_73
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

80091..81056
DNA (966bp) protein (322aa)
ABC transporter related protein n=1 Tax=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) RepID=Q1QZE2_CHRSD
ABC transporter-like protein
ABC transporter-like protein {ECO:0000313|EMBL:EHK57040.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobiu
SCNpilot_solid_1_scaffold_31_74
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

81053..81814
DNA (762bp) protein (254aa)
ABC transporter permease protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5NZ28_AROAE
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimo
ABC transporter permease
SCNpilot_solid_1_scaffold_31_75
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(81822..82949)
DNA (1128bp) protein (376aa)
Putative serine-pyruvate aminotransferase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GSY2_PUSST rbh
Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase rbh
Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase {ECO:0000313|EMBL:CDM24191.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae
SCNpilot_solid_1_scaffold_31_76
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

83106..84386
DNA (1281bp) protein (427aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI00030FD6EF
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CDM24190.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_31_77
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

84383..85597
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GUU1_PUSST rbh
Benzoate transport protein rbh
Benzoate transport protein {ECO:0000313|EMBL:CDM24189.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella
SCNpilot_solid_1_scaffold_31_78
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(85646..86701)
DNA (1056bp) protein (352aa)
TRAP-type C4-dicarboxylate transport system, periplasmic component n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WKJ3_9BURK rbh
TRAP transporter solute receptor rbh
TRAP transporter solute receptor {ECO:0000313|EMBL:CDM24188.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castella
SCNpilot_solid_1_scaffold_31_79
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(86756..88090)
DNA (1335bp) protein (445aa)
TRAP dicarboxylate transporter, DctM subunit n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y532_LEPCP rbh
TRAP dicarboxylate transporter, DctM subunit rbh
TRAP dicarboxylate transporter, DctM subunit {ECO:0000313|EMBL:CDM24186.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" sour
SCNpilot_solid_1_scaffold_31_80
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(88087..88650)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M8N5_GEODF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM24185.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_31_81
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(88742..90193)
DNA (1452bp) protein (484aa)
salicylaldehyde dehydrogenase n=1 Tax=Thiomonas sp. FB-6 RepID=UPI00035E9299
Probable VANILLIN dehydrogenase oxidoreductase protein rbh
Probable VANILLIN dehydrogenase oxidoreductase protein {ECO:0000313|EMBL:CDM24183.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniel
SCNpilot_solid_1_scaffold_31_82
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(90246..91865)
DNA (1620bp) protein (540aa)
Benzoylformate decarboxylase (EC:4.1.1.7) rbh
Benzoylformate decarboxylase {ECO:0000313|EMBL:CDM24182.1}; EC=4.1.1.7 {ECO:0000313|EMBL:CDM24182.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenac
Pyruvate decarboxylase or related thiamine pyrophosphate-requiring enzyme n=1 Tax=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) RepID=Q0KCL7_CUPNH rbh
SCNpilot_solid_1_scaffold_31_83
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

92023..92925
DNA (903bp) protein (301aa)
Transcriptional regulator, LysR family-like protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XY30_RAMTT rbh
transcriptional regulator, LysR family rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:CDM24181.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Ca
SCNpilot_solid_1_scaffold_31_84
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(92949..94283)
DNA (1335bp) protein (445aa)
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46U18_CUPPJ rbh
Branched-chain amino acid transport ATP-binding protein LivF rbh
Branched-chain amino acid transport ATP-binding protein LivF {ECO:0000313|EMBL:CDM24180.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castel
SCNpilot_solid_1_scaffold_31_85
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(94276..95025)
DNA (750bp) protein (250aa)
hemolysin III n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI0003718A2F
putative ATP-binding ABC transporter protein
Putative ATP-binding ABC transporter protein {ECO:0000313|EMBL:CDM24179.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" sour
SCNpilot_solid_1_scaffold_31_86
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(95022..96074)
DNA (1053bp) protein (351aa)
ABC transporter permease n=1 Tax=Herbaspirillum seropedicae RepID=UPI00031715FE
Branched-chain amino acid transport system permease protein LivM rbh
Branched-chain amino acid transport system permease protein LivM {ECO:0000313|EMBL:CDM24178.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Ca
SCNpilot_solid_1_scaffold_31_87
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(96084..96941)
DNA (858bp) protein (286aa)
Branched-chain amino acid ABC-type transport system, permease component n=1 Tax=Rhizobium sp. CF142 RepID=J1SQU4_9RHIZ
High-affinity branched-chain amino acid transport system permease protein LivH rbh
High-affinity branched-chain amino acid transport system permease protein LivH {ECO:0000313|EMBL:CDM24177.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alca
SCNpilot_solid_1_scaffold_31_88
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(97046..98221)
DNA (1176bp) protein (392aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI000379FEC3 rbh
Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein rbh
Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein {ECO:0000313|EMBL:CDM24176.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenac
Displaying items 61-90 of 153 in total

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