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SCNpilot_solid_1_scaffold_31_83

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 92023..92925

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family-like protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XY30_RAMTT similarity UNIREF
DB: UNIREF100
  • Identity: 59.3
  • Coverage: 297.0
  • Bit_score: 347
  • Evalue 1.30e-92
  • rbh
transcriptional regulator, LysR family similarity KEGG
DB: KEGG
  • Identity: 69.8
  • Coverage: 295.0
  • Bit_score: 410
  • Evalue 3.50e-112
  • rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:CDM24181.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Ca similarity UNIPROT
DB: UniProtKB
  • Identity: 69.8
  • Coverage: 295.0
  • Bit_score: 410
  • Evalue 1.70e-111

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 903
ATGAATAACAAGAACCTGGACCTCAACCTGCTGCGGGTCTTCGACGCCGTATATGGCGCTGGCAGCGTCAGCCAGGCGGCCGCCCTGCTGGACCTGACGCAGCCCGCCGTCAGCCAGGGGCTGACACGCCTGCGCAATCTGGTCGGAGACCCGCTGTTCGTCCGCGCGGCCGGCGGCGTGGCGCCCACGCCCCGGGCGCAGCGCATGGCGCAGCCCATCCGCGACGCCCTGCAGGCCCTGGAAAGCGCCGCGCTGGACTCGGCGCCCTTCGACCCGCTGCGCTCGGACCGGCGCTTTCGCCTGCACATGACGGACATCGGCGAAGGCCAGTTCCTGCCCCGCCTGGCGCAGGCGATGCGCCAGCGGGCTCCGCACGCCCGCATCGAAACCATGCGCCTGGCCATGCCGGACCTGGCGCCCGCCCTGGACCAGGGCCGCATCGACCTGGCCTTCGGCTTCCTGCCGGGATTGCAGGGCATGCAGTCAGCGGTGATGTTCCAGGACCGCTACATCGTCCTGATGCGCCAGCACCATCCCTTCACCCGGACGCGCCGCGCGGCGCCGATCCCGCTGGACGACATCCGGGCGCTGGAGTTCATCGCCGTGCGCACCCACGCCTATACCCATACCGCGCTGGAAGCCCTGCACATGCAGGACCGCATCCGGCTGACGACGGAACACTTCATGGCCCTGCCCTCCGTCATCGACAGCAGCGACCTGGCCGTAATCATCCCGCGCAACATCGCCCGCTCGTTCGAGCCGGCCAGGCGCTACGCCATCGTCGAGGCGGATTTCCCGCTGCGCGACTTCAACGTGGGCATCCACTGGAGCCGCCGGCAGGACGGCGACCCCGCCCACCGCTGGCTGCGCAGCCTGGTCCTGGAGCTCTACCAGGAGACCTGA
PROTEIN sequence
Length: 301
MNNKNLDLNLLRVFDAVYGAGSVSQAAALLDLTQPAVSQGLTRLRNLVGDPLFVRAAGGVAPTPRAQRMAQPIRDALQALESAALDSAPFDPLRSDRRFRLHMTDIGEGQFLPRLAQAMRQRAPHARIETMRLAMPDLAPALDQGRIDLAFGFLPGLQGMQSAVMFQDRYIVLMRQHHPFTRTRRAAPIPLDDIRALEFIAVRTHAYTHTALEALHMQDRIRLTTEHFMALPSVIDSSDLAVIIPRNIARSFEPARRYAIVEADFPLRDFNVGIHWSRRQDGDPAHRWLRSLVLELYQET*