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SCNpilot_solid_1_scaffold_31_78

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(85646..86701)

Top 3 Functional Annotations

Value Algorithm Source
TRAP-type C4-dicarboxylate transport system, periplasmic component n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WKJ3_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 61.1
  • Coverage: 334.0
  • Bit_score: 432
  • Evalue 4.60e-118
  • rbh
TRAP transporter solute receptor similarity KEGG
DB: KEGG
  • Identity: 88.6
  • Coverage: 341.0
  • Bit_score: 626
  • Evalue 3.60e-177
  • rbh
TRAP transporter solute receptor {ECO:0000313|EMBL:CDM24188.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castella similarity UNIPROT
DB: UniProtKB
  • Identity: 88.6
  • Coverage: 341.0
  • Bit_score: 626
  • Evalue 1.80e-176

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1056
GTGAAAACCTCTTACCGCGCATTCTCCCGACGTCTGCTGGGCGGTGTGGCCGCCGGCCTGCTGCTGACCGCGGCCGCGCATGGCGAACAGATCGTCCTCAAGGTTCACCACTTCCTGCCGGCCACCTCCAATGCCCAGGTCAACATGATCCAGCCCTGGTGCAACAAGATCGCCAAGGAATCGCAGGATCGCATGGTGTGCCAGATCTATCCGGCCATGCAACTCGGCGGCACGCCGGCGCAGCTGTTCGATCAGGCCCGCGACGGCGTGGCGGACATCGTCTGGACCCTGCCCACCTATGCCGCAGGGCGCTTCACCAAGAGCGCGGTCTACGAACTGCCCTGGCTGGTGCCCAATGCCGAGGCCGGCAGCCGAGCCCTGTGGGAATTCACGCAGAAGTACGCCCTGGACGAATACAAAGGCGTGCATCCGATCTTCATGCATACCCATGGCGGCACCTTGATGCACTTCGTCAGCAAGCAGCCCCGGACGCTGGCCGACATGAAGGGCCTGAAGATCCGTTCGGCCAACCGGGTCAACTCGCAGATGCTGGACGCCATCGGCGCGGTGCCGGTGCAGATGCCGCTGCCTGCGGTGCCCGATTCCCTGGCCAAGGGCGTGGTCGACGGGGCTGCCGTGCCGTGGGAAGGCGTTCCCGCGATCAAGCTCGATGAGATCTCCCGCTACCATCTGGATGTGCCCCAGGGCAAGCCGCGCATGGGCAATTCGATCTTCCTGTTTGGCATGAACCAGGCGCGCTACGACAGCCTGCCAGCCGATCTGAAGAAGATCATCGACGACAATAGCGGCGCCGACGTGTCGGCCTGGGCCGGGCGCACCGTGTTCGACGAACGGGAAGCCGAGTTCATGAAGACGTCGAAGGAAAACGGCAGCGTCTTCCACTACATGGATGAGGCCGAATATCAGAACTGGGTCGCGGCCACCCAGGGCGTGCGGGATCTCTGGATCCAGGCCGTGGACAAGAAGGGCGGCCAGGGAGCCGACCTGTATGCCGCCGCGCGCAATCTGATCAAGCAGTACGCGACGCGCCATTGA
PROTEIN sequence
Length: 352
VKTSYRAFSRRLLGGVAAGLLLTAAAHGEQIVLKVHHFLPATSNAQVNMIQPWCNKIAKESQDRMVCQIYPAMQLGGTPAQLFDQARDGVADIVWTLPTYAAGRFTKSAVYELPWLVPNAEAGSRALWEFTQKYALDEYKGVHPIFMHTHGGTLMHFVSKQPRTLADMKGLKIRSANRVNSQMLDAIGAVPVQMPLPAVPDSLAKGVVDGAAVPWEGVPAIKLDEISRYHLDVPQGKPRMGNSIFLFGMNQARYDSLPADLKKIIDDNSGADVSAWAGRTVFDEREAEFMKTSKENGSVFHYMDEAEYQNWVAATQGVRDLWIQAVDKKGGQGADLYAAARNLIKQYATRH*