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SCNpilot_solid_1_scaffold_31_87

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(96084..96941)

Top 3 Functional Annotations

Value Algorithm Source
Branched-chain amino acid ABC-type transport system, permease component n=1 Tax=Rhizobium sp. CF142 RepID=J1SQU4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 67.5
  • Coverage: 283.0
  • Bit_score: 385
  • Evalue 4.00e-104
High-affinity branched-chain amino acid transport system permease protein LivH similarity KEGG
DB: KEGG
  • Identity: 90.5
  • Coverage: 285.0
  • Bit_score: 517
  • Evalue 2.50e-144
  • rbh
High-affinity branched-chain amino acid transport system permease protein LivH {ECO:0000313|EMBL:CDM24177.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alca similarity UNIPROT
DB: UniProtKB
  • Identity: 90.5
  • Coverage: 285.0
  • Bit_score: 517
  • Evalue 1.20e-143

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 858
ATGACTATATTATTCGACGGCCTTGCCTACGGCATGCTGCTGTTTCTGATCAGCGTCGGGCTGTCCGTGACCCTGGGCCTGATGAACTTCGTCAACCTGGCCCATGGCGCTTTCGCCATGCTGGGCGGCTACGCCTGCGTGATCCTGCTCAATGGCTACGGGGTGCCTTTTCTGGCGACCCTTCCCGTGGCCGTCATCGTGCCGGCCATCGCCGGCGTCATCCTGGAACGGCTGCTGTACCGGCGCCTGTATGCGGCGTCGGAACTGGACCAGGTGCTGTTTTCCATCGGCCTGGTGTTCATGGCGGTCGCGGCGGCGCACTATTTCTTCGGCGCCCAGCAGCAGCCCCTGCACCTGCCCGCCTTCCTGTCCGGACAGATCCACGTCATGCCGGGGCTGGACGTGGGCGTCTATCGCCTGTTCCTGATCATCGCCGGCCTGCTGGTGGCGGTGCTGCTGCAGTGGTCCGTGATCCGCACTTCGTTCGGCGCCCGCCTGCGGGCCGCCGTGGACAACCAGCGCGTGGCGCGCGGCCTGGGGGTGGACGTCAACCGCGTCTTCAGCCTGACCTTCGCGCTGGGTTCGGCCCTGGCGGGCCTGGGCGGCGCCCTGGGCGTGGAGATGCTGGGTCTGGACCCCGAATTCCCCGTCAAGTATCTGGTGTACTTCCTGATCGTGGTGTCGGTGGGCGGCAGCGGCAACATCCTCGGCTCCCTGTATGCCGCCATCCTGCTGGGGGTGGCCGACGTGGCCGGCAAATACTACATCCCCCAGGTGGGCGCCTTCATCATCTACGCCGTCATGGTGGTGACGCTGATCTATCGTCCGCATGGCCTGTTCGGCCGCTCTCACAAATAG
PROTEIN sequence
Length: 286
MTILFDGLAYGMLLFLISVGLSVTLGLMNFVNLAHGAFAMLGGYACVILLNGYGVPFLATLPVAVIVPAIAGVILERLLYRRLYAASELDQVLFSIGLVFMAVAAAHYFFGAQQQPLHLPAFLSGQIHVMPGLDVGVYRLFLIIAGLLVAVLLQWSVIRTSFGARLRAAVDNQRVARGLGVDVNRVFSLTFALGSALAGLGGALGVEMLGLDPEFPVKYLVYFLIVVSVGGSGNILGSLYAAILLGVADVAGKYYIPQVGAFIIYAVMVVTLIYRPHGLFGRSHK*