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SCNpilot_solid_1_scaffold_31

Search features with annotation key words

Displaying items 91-120 of 153 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_31_89
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(98259..99218)
DNA (960bp) protein (320aa)
oxidoreductase n=1 Tax=Curvibacter lanceolatus RepID=UPI00037B0CF6
4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase
4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase {ECO:0000313|EMBL:CDM24175.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellani
SCNpilot_solid_1_scaffold_31_90
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(99215..100084)
DNA (870bp) protein (290aa)
Protocatechuate 4,5-dioxygenase beta chain (EC:1.13.11.8) rbh
Protocatechuate 4,5-dioxygenase beta chain {ECO:0000313|EMBL:CDM24174.1}; EC=1.13.11.8 {ECO:0000313|EMBL:CDM24174.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderia
Candidate protocatechuate 4,5-dioxygenase beta chain n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y1Z0_RAMTT rbh
SCNpilot_solid_1_scaffold_31_91
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(100081..100470)
DNA (390bp) protein (130aa)
Protocatechuate 4,5-dioxygenase alpha chain (EC:1.13.11.8)
Protocatechuate 4,5-dioxygenase alpha chain {ECO:0000313|EMBL:CDM24173.1}; EC=1.13.11.8 {ECO:0000313|EMBL:CDM24173.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderi
Protocatechuate 4,5-dioxygenase n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q13CG8_RHOPS
SCNpilot_solid_1_scaffold_31_92
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(100474..101391)
DNA (918bp) protein (306aa)
2-pyrone-4,6-dicarboxylate hydrolase n=1 Tax=Thiomonas sp. FB-6 RepID=UPI000372A71E
2-pyrone-4,6-dicarboxylic acid hydrolase rbh
2-pyrone-4,6-dicarboxylic acid hydrolase {ECO:0000313|EMBL:CDM24172.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="
SCNpilot_solid_1_scaffold_31_93
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(101402..102097)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6Z038_9RHOO
2-demethylmenaquinone methyltransferase rbh
2-demethylmenaquinone methyltransferase {ECO:0000313|EMBL:CDM24171.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="C
SCNpilot_solid_1_scaffold_31_94
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(102115..103158)
DNA (1044bp) protein (348aa)
4-oxalomesaconate hydratase (EC:4.2.1.83) rbh
4-oxalomesaconate hydratase {ECO:0000313|EMBL:CDM24170.1}; EC=4.2.1.83 {ECO:0000313|EMBL:CDM24170.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenac
fldW; 4-oxalomesaconate hydratase (EC:4.1.1.45); K10220 4-oxalmesaconate hydratase [EC:4.2.1.83] id=5079371 bin=GWF1_Burkholderiales_GWF1_66_17 species=Albidiferax ferrireducens genus=Albidiferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
SCNpilot_solid_1_scaffold_31_95
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(103187..104317)
DNA (1131bp) protein (377aa)
Methylitaconate delta2-delta3-isomerase n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VNW4_POLNA
FldA protein rbh
FldA protein {ECO:0000313|EMBL:CDM24169.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65
SCNpilot_solid_1_scaffold_31_96
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

104482..105396
DNA (915bp) protein (305aa)
LysR family transcriptional regulator n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KVL3_9BURK rbh
LysR family transcriptional regulator Tax=GWA2_Curvibacter_64_110_curated
transcriptional regulator, LysR family
SCNpilot_solid_1_scaffold_31_97
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(105407..106303)
DNA (897bp) protein (299aa)
6-phosphogluconate dehydrogenase n=1 Tax=Acidovorax radicis RepID=UPI0002375551 rbh
3-hydroxyisobutyrate dehydrogenase rbh
3-hydroxyisobutyrate dehydrogenase {ECO:0000313|EMBL:CDM24167.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castel
SCNpilot_solid_1_scaffold_31_98
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(106365..107306)
DNA (942bp) protein (314aa)
Aldo-keto reductase n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6Z034_9RHOO
Aldo-keto reductase rbh
Aldo-keto reductase {ECO:0000313|EMBL:CDM24166.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defrag
SCNpilot_solid_1_scaffold_31_99
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(107462..108634)
DNA (1173bp) protein (391aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0003054C3C
Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein rbh
Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein {ECO:0000313|EMBL:CDM24165.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenac
SCNpilot_solid_1_scaffold_31_100
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(108681..109691)
DNA (1011bp) protein (337aa)
Vanillate O-demethylase (Vanillate degradation ferredoxin-like) oxidoreductase protein n=1 Tax=Herbaspirillum seropedicae (strain SmR1) RepID=D8ISP6_HERSS rbh
Vanillate O-demethylase oxidoreductase rbh
Vanillate O-demethylase oxidoreductase {ECO:0000313|EMBL:CDM24164.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Ca
SCNpilot_solid_1_scaffold_31_101
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(109725..110777)
DNA (1053bp) protein (351aa)
Rieske (2Fe-2S) protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0003113BA5 rbh
Probable vanillate O-demethylase oxygenase subunit oxidoreductase protein rbh
Probable vanillate O-demethylase oxygenase subunit oxidoreductase protein {ECO:0000313|EMBL:CDM24163.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligen
SCNpilot_solid_1_scaffold_31_102
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(110963..111472)
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI00031F8B5E
Transcriptional regulator, MarR family
Transcriptional regulator, MarR family {ECO:0000313|EMBL:CDM24162.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Ca
SCNpilot_solid_1_scaffold_31_103
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

111627..112358
DNA (732bp) protein (244aa)
Putative hydrolase or acyltransferase of alpha/beta superfamily n=1 Tax=Xanthomonas vesicatoria ATCC 35937 RepID=F0BH01_9XANT
hydrolase rbh
Hydrolase {ECO:0000313|EMBL:CDM24161.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phe
SCNpilot_solid_1_scaffold_31_104
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(112398..113249)
DNA (852bp) protein (284aa)
2,3-dihydroxyphenylpropionate 1,2-dioxygenase n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SAM5_9BRAD rbh
Protocatechuate 4,5-dioxygenase beta chain rbh
Protocatechuate 4,5-dioxygenase beta chain {ECO:0000313|EMBL:CDM24160.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source
SCNpilot_solid_1_scaffold_31_105
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(113252..113614)
DNA (363bp) protein (121aa)
Protocatechuate 4,5-dioxygenase alpha chain (EC:1.13.11.8)
Protocatechuate 4,5-dioxygenase alpha chain {ECO:0000313|EMBL:CDM24159.1}; EC=1.13.11.8 {ECO:0000313|EMBL:CDM24159.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderi
protocatechuate 4,5-dioxygenase subunit alpha n=1 Tax=Ideonella sp. B508-1 RepID=UPI0003450D48
SCNpilot_solid_1_scaffold_31_106
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

113792..114796
DNA (1005bp) protein (335aa)
Putative transcriptional regulator n=1 Tax=Pseudomonas stutzeri B1SMN1 RepID=S6JVX0_PSEST
Transcriptional regulator PobR, AraC family rbh
Transcriptional regulator PobR, AraC family {ECO:0000313|EMBL:CDM24158.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" sourc
SCNpilot_solid_1_scaffold_31_107
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(114778..115956)
DNA (1179bp) protein (393aa)
P-hydroxybenzoate hydroxylase (EC:1.14.13.2) rbh
P-hydroxybenzoate hydroxylase {ECO:0000313|EMBL:CDM24157.1}; EC=1.14.13.2 {ECO:0000313|EMBL:CDM24157.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcalige
4-hydroxybenzoate 3-monooxygenase n=1 Tax=Marinobacterium rhizophilum RepID=UPI00037BB561 rbh
SCNpilot_solid_1_scaffold_31_108
Azotobacter chroococcum, Azotobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

116000..117013
DNA (1014bp) protein (338aa)
hypothetical protein n=1 Tax=Dasania marina RepID=UPI00036D6E33
pobR; Transcriptional regulator PobR (AraC family)
PobR protein {ECO:0000313|EMBL:AJE22264.1}; TaxID=1328314 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Azotobacter.;" source="Azotobacter chroococcum NCIM
SCNpilot_solid_1_scaffold_31_109
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(117216..118244)
DNA (1029bp) protein (343aa)
Alcohol dehydrogenase (EC:1.1.1.1) rbh
Alcohol dehydrogenase {ECO:0000313|EMBL:CDM24152.1}; EC=1.1.1.1 {ECO:0000313|EMBL:CDM24152.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Ca
Alcohol dehydrogenase, zinc-containing n=1 Tax=Halomonas elongata (strain ATCC 33173 / DSM 2581 / NBRC 15536 / NCIMB 2198 / 1H9) RepID=E1V3M3_HALED rbh
SCNpilot_solid_1_scaffold_31_110
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(118357..119883)
DNA (1527bp) protein (509aa)
Aldehyde dehydrogenase (EC:1.2.1.3) rbh
Aldehyde dehydrogenase {ECO:0000313|EMBL:CDM24151.1}; EC=1.2.1.3 {ECO:0000313|EMBL:CDM24151.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; C
Aldehyde Dehydrogenase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GTN2_PUSST rbh
SCNpilot_solid_1_scaffold_31_111
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

120198..122087
DNA (1890bp) protein (630aa)
Putative sigma-54-dependent transcriptional regulator n=1 Tax=Bordetella bronchiseptica (strain MO149) RepID=K0MXM3_BORBM rbh
putative sigma-54-dependent transcriptional regulator rbh
Putative sigma-54-dependent transcriptional regulator {ECO:0000313|EMBL:CDM24150.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniell
SCNpilot_solid_1_scaffold_31_112
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(122137..124326)
DNA (2190bp) protein (730aa)
RNA polymerase sigma factor RpoD n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GUU3_PUSST rbh
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963, ECO:0000313|EMBL:CDM24149.1}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteo
RNA polymerase sigma factor RpoD rbh
SCNpilot_solid_1_scaffold_31_113
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(124461..126395)
DNA (1935bp) protein (645aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051044}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051045};; TaxID=1437824 species="Bacteria; Proteobacte
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI00030F4075 rbh
DNA primase rbh
SCNpilot_solid_1_scaffold_31_114
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(126396..126608)
DNA (213bp) protein (71aa)
30S ribosomal protein S21 n=1 Tax=Bordetella sp. FB-8 RepID=UPI00037F8BCE
SSU ribosomal protein S21p
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castel
SCNpilot_solid_1_scaffold_31_115
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(126741..127304)
DNA (564bp) protein (188aa)
Xanthine-guanine phosphoribosyltransferase (EC:2.4.2.22) rbh
Xanthine-guanine phosphoribosyltransferase {ECO:0000313|EMBL:CDM24146.1}; EC=2.4.2.22 {ECO:0000313|EMBL:CDM24146.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderial
Nicotinate phosphoribosyltransferase n=1 Tax=Pelistega sp. HM-7 RepID=V8FWI1_9BURK rbh
SCNpilot_solid_1_scaffold_31_116
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(127462..128781)
DNA (1320bp) protein (440aa)
Adenylosuccinate synthetase (EC:6.3.4.4) rbh
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.
Adenylosuccinate synthetase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GUU8_PUSST rbh
SCNpilot_solid_1_scaffold_31_117
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(128813..129979)
DNA (1167bp) protein (389aa)
ATP phosphoribosyltransferase regulatory subunit (EC:2.4.2.17) rbh
ATP phosphoribosyltransferase regulatory subunit n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GUU9_PUSST rbh
ATP phosphoribosyltransferase regulatory subunit {ECO:0000256|HAMAP-Rule:MF_00125, ECO:0000256|SAAS:SAAS00089029}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
SCNpilot_solid_1_scaffold_31_118
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(130054..130941)
DNA (888bp) protein (296aa)
Protein HflC n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GUV0_PUSST rbh
HflC protein rbh
Protein HflC {ECO:0000256|PIRNR:PIRNR005651}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans
Displaying items 91-120 of 153 in total

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