name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_solid_1_scaffold_31_89
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(98259..99218)
|
oxidoreductase n=1 Tax=Curvibacter lanceolatus RepID=UPI00037B0CF6
4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase
4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase {ECO:0000313|EMBL:CDM24175.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellani
|
|
SCNpilot_solid_1_scaffold_31_90
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(99215..100084)
|
Protocatechuate 4,5-dioxygenase beta chain (EC:1.13.11.8)
rbh
Protocatechuate 4,5-dioxygenase beta chain {ECO:0000313|EMBL:CDM24174.1}; EC=1.13.11.8 {ECO:0000313|EMBL:CDM24174.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderia
Candidate protocatechuate 4,5-dioxygenase beta chain n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y1Z0_RAMTT
rbh
|
|
SCNpilot_solid_1_scaffold_31_91
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(100081..100470)
|
Protocatechuate 4,5-dioxygenase alpha chain (EC:1.13.11.8)
Protocatechuate 4,5-dioxygenase alpha chain {ECO:0000313|EMBL:CDM24173.1}; EC=1.13.11.8 {ECO:0000313|EMBL:CDM24173.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderi
Protocatechuate 4,5-dioxygenase n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q13CG8_RHOPS
|
|
SCNpilot_solid_1_scaffold_31_92
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(100474..101391)
|
2-pyrone-4,6-dicarboxylate hydrolase n=1 Tax=Thiomonas sp. FB-6 RepID=UPI000372A71E
2-pyrone-4,6-dicarboxylic acid hydrolase
rbh
2-pyrone-4,6-dicarboxylic acid hydrolase {ECO:0000313|EMBL:CDM24172.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="
|
|
SCNpilot_solid_1_scaffold_31_93
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(101402..102097)
|
Uncharacterized protein n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6Z038_9RHOO
2-demethylmenaquinone methyltransferase
rbh
2-demethylmenaquinone methyltransferase {ECO:0000313|EMBL:CDM24171.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="C
|
|
SCNpilot_solid_1_scaffold_31_94
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(102115..103158)
|
4-oxalomesaconate hydratase (EC:4.2.1.83)
rbh
4-oxalomesaconate hydratase {ECO:0000313|EMBL:CDM24170.1}; EC=4.2.1.83 {ECO:0000313|EMBL:CDM24170.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenac
fldW; 4-oxalomesaconate hydratase (EC:4.1.1.45); K10220 4-oxalmesaconate hydratase [EC:4.2.1.83] id=5079371 bin=GWF1_Burkholderiales_GWF1_66_17 species=Albidiferax ferrireducens genus=Albidiferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
rbh
|
|
SCNpilot_solid_1_scaffold_31_95
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(103187..104317)
|
Methylitaconate delta2-delta3-isomerase n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VNW4_POLNA
FldA protein
rbh
FldA protein {ECO:0000313|EMBL:CDM24169.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65
|
|
SCNpilot_solid_1_scaffold_31_96
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
104482..105396
|
LysR family transcriptional regulator n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KVL3_9BURK
rbh
LysR family transcriptional regulator Tax=GWA2_Curvibacter_64_110_curated
transcriptional regulator, LysR family
|
|
SCNpilot_solid_1_scaffold_31_97
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(105407..106303)
|
6-phosphogluconate dehydrogenase n=1 Tax=Acidovorax radicis RepID=UPI0002375551
rbh
3-hydroxyisobutyrate dehydrogenase
rbh
3-hydroxyisobutyrate dehydrogenase {ECO:0000313|EMBL:CDM24167.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castel
|
|
SCNpilot_solid_1_scaffold_31_98
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(106365..107306)
|
Aldo-keto reductase n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6Z034_9RHOO
Aldo-keto reductase
rbh
Aldo-keto reductase {ECO:0000313|EMBL:CDM24166.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defrag
|
|
SCNpilot_solid_1_scaffold_31_99
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(107462..108634)
|
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0003054C3C
Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein
rbh
Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein {ECO:0000313|EMBL:CDM24165.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenac
|
|
SCNpilot_solid_1_scaffold_31_100
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(108681..109691)
|
Vanillate O-demethylase (Vanillate degradation ferredoxin-like) oxidoreductase protein n=1 Tax=Herbaspirillum seropedicae (strain SmR1) RepID=D8ISP6_HERSS
rbh
Vanillate O-demethylase oxidoreductase
rbh
Vanillate O-demethylase oxidoreductase {ECO:0000313|EMBL:CDM24164.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Ca
|
|
SCNpilot_solid_1_scaffold_31_101
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(109725..110777)
|
Rieske (2Fe-2S) protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0003113BA5
rbh
Probable vanillate O-demethylase oxygenase subunit oxidoreductase protein
rbh
Probable vanillate O-demethylase oxygenase subunit oxidoreductase protein {ECO:0000313|EMBL:CDM24163.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligen
|
|
SCNpilot_solid_1_scaffold_31_102
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(110963..111472)
|
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI00031F8B5E
Transcriptional regulator, MarR family
Transcriptional regulator, MarR family {ECO:0000313|EMBL:CDM24162.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Ca
|
|
SCNpilot_solid_1_scaffold_31_103
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
111627..112358
|
Putative hydrolase or acyltransferase of alpha/beta superfamily n=1 Tax=Xanthomonas vesicatoria ATCC 35937 RepID=F0BH01_9XANT
hydrolase
rbh
Hydrolase {ECO:0000313|EMBL:CDM24161.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phe
|
|
SCNpilot_solid_1_scaffold_31_104
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(112398..113249)
|
2,3-dihydroxyphenylpropionate 1,2-dioxygenase n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SAM5_9BRAD
rbh
Protocatechuate 4,5-dioxygenase beta chain
rbh
Protocatechuate 4,5-dioxygenase beta chain {ECO:0000313|EMBL:CDM24160.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source
|
|
SCNpilot_solid_1_scaffold_31_105
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(113252..113614)
|
Protocatechuate 4,5-dioxygenase alpha chain (EC:1.13.11.8)
Protocatechuate 4,5-dioxygenase alpha chain {ECO:0000313|EMBL:CDM24159.1}; EC=1.13.11.8 {ECO:0000313|EMBL:CDM24159.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderi
protocatechuate 4,5-dioxygenase subunit alpha n=1 Tax=Ideonella sp. B508-1 RepID=UPI0003450D48
|
|
SCNpilot_solid_1_scaffold_31_106
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
113792..114796
|
Putative transcriptional regulator n=1 Tax=Pseudomonas stutzeri B1SMN1 RepID=S6JVX0_PSEST
Transcriptional regulator PobR, AraC family
rbh
Transcriptional regulator PobR, AraC family {ECO:0000313|EMBL:CDM24158.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" sourc
|
|
SCNpilot_solid_1_scaffold_31_107
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(114778..115956)
|
P-hydroxybenzoate hydroxylase (EC:1.14.13.2)
rbh
P-hydroxybenzoate hydroxylase {ECO:0000313|EMBL:CDM24157.1}; EC=1.14.13.2 {ECO:0000313|EMBL:CDM24157.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcalige
4-hydroxybenzoate 3-monooxygenase n=1 Tax=Marinobacterium rhizophilum RepID=UPI00037BB561
rbh
|
|
SCNpilot_solid_1_scaffold_31_108
Azotobacter chroococcum, Azotobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
116000..117013
|
hypothetical protein n=1 Tax=Dasania marina RepID=UPI00036D6E33
pobR; Transcriptional regulator PobR (AraC family)
PobR protein {ECO:0000313|EMBL:AJE22264.1}; TaxID=1328314 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Azotobacter.;" source="Azotobacter chroococcum NCIM
|
|
SCNpilot_solid_1_scaffold_31_109
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(117216..118244)
|
Alcohol dehydrogenase (EC:1.1.1.1)
rbh
Alcohol dehydrogenase {ECO:0000313|EMBL:CDM24152.1}; EC=1.1.1.1 {ECO:0000313|EMBL:CDM24152.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Ca
Alcohol dehydrogenase, zinc-containing n=1 Tax=Halomonas elongata (strain ATCC 33173 / DSM 2581 / NBRC 15536 / NCIMB 2198 / 1H9) RepID=E1V3M3_HALED
rbh
|
|
SCNpilot_solid_1_scaffold_31_110
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(118357..119883)
|
Aldehyde dehydrogenase (EC:1.2.1.3)
rbh
Aldehyde dehydrogenase {ECO:0000313|EMBL:CDM24151.1}; EC=1.2.1.3 {ECO:0000313|EMBL:CDM24151.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; C
Aldehyde Dehydrogenase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GTN2_PUSST
rbh
|
|
SCNpilot_solid_1_scaffold_31_111
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
120198..122087
|
Putative sigma-54-dependent transcriptional regulator n=1 Tax=Bordetella bronchiseptica (strain MO149) RepID=K0MXM3_BORBM
rbh
putative sigma-54-dependent transcriptional regulator
rbh
Putative sigma-54-dependent transcriptional regulator {ECO:0000313|EMBL:CDM24150.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniell
|
|
SCNpilot_solid_1_scaffold_31_112
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(122137..124326)
|
RNA polymerase sigma factor RpoD n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GUU3_PUSST
rbh
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963, ECO:0000313|EMBL:CDM24149.1}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteo
RNA polymerase sigma factor RpoD
rbh
|
|
SCNpilot_solid_1_scaffold_31_113
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(124461..126395)
|
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051044}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051045};; TaxID=1437824 species="Bacteria; Proteobacte
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI00030F4075
rbh
DNA primase
rbh
|
|
SCNpilot_solid_1_scaffold_31_114
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(126396..126608)
|
30S ribosomal protein S21 n=1 Tax=Bordetella sp. FB-8 RepID=UPI00037F8BCE
SSU ribosomal protein S21p
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castel
|
|
SCNpilot_solid_1_scaffold_31_115
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(126741..127304)
|
Xanthine-guanine phosphoribosyltransferase (EC:2.4.2.22)
rbh
Xanthine-guanine phosphoribosyltransferase {ECO:0000313|EMBL:CDM24146.1}; EC=2.4.2.22 {ECO:0000313|EMBL:CDM24146.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderial
Nicotinate phosphoribosyltransferase n=1 Tax=Pelistega sp. HM-7 RepID=V8FWI1_9BURK
rbh
|
|
SCNpilot_solid_1_scaffold_31_116
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(127462..128781)
|
Adenylosuccinate synthetase (EC:6.3.4.4)
rbh
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.
Adenylosuccinate synthetase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GUU8_PUSST
rbh
|
|
SCNpilot_solid_1_scaffold_31_117
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(128813..129979)
|
ATP phosphoribosyltransferase regulatory subunit (EC:2.4.2.17)
rbh
ATP phosphoribosyltransferase regulatory subunit n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GUU9_PUSST
rbh
ATP phosphoribosyltransferase regulatory subunit {ECO:0000256|HAMAP-Rule:MF_00125, ECO:0000256|SAAS:SAAS00089029}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
|
|
SCNpilot_solid_1_scaffold_31_118
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(130054..130941)
|
Protein HflC n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GUV0_PUSST
rbh
HflC protein
rbh
Protein HflC {ECO:0000256|PIRNR:PIRNR005651}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans
|