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SCNpilot_solid_1_scaffold_31_111

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 120198..122087

Top 3 Functional Annotations

Value Algorithm Source
Putative sigma-54-dependent transcriptional regulator n=1 Tax=Bordetella bronchiseptica (strain MO149) RepID=K0MXM3_BORBM similarity UNIREF
DB: UNIREF100
  • Identity: 49.3
  • Coverage: 627.0
  • Bit_score: 515
  • Evalue 7.40e-143
  • rbh
putative sigma-54-dependent transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 81.3
  • Coverage: 653.0
  • Bit_score: 1021
  • Evalue 1.20e-295
  • rbh
Putative sigma-54-dependent transcriptional regulator {ECO:0000313|EMBL:CDM24150.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniell similarity UNIPROT
DB: UniProtKB
  • Identity: 81.3
  • Coverage: 653.0
  • Bit_score: 1021
  • Evalue 5.80e-295

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1890
ATGCTGCATTCACCGCCACTTGCCCTCGCCCCGGACGCCCGCGCCCAGGCCGCCACCCGCATCCACCAGTCCTGGGCGCGCTGCGCCGACCTGGACCCCGCCCTGCTGGCCGACCCCAATCCGCTGCCCCGCGCCGACCTGGACATGCGCCGCGAGGCCCACCGGCAGTTGCTGCGCCTGGCCGAACCCAGCCTCGGTGCGCTGAGCGCGCTGGCGGGCTCGATGCACAGTGTCGTGCTGCTGGCCGACGCCAGCGGCCTGATCCTGCACGAGCGCGGCAGCCACAGCTTCCAGGACAAGGCGCGCCGCGTGGCGCTGCAGCCCGGGGTCAACTGGGCCGAGCCCCTGCGCGGCACCAACGCCATCGGCACGGCGCTGCACGACGGCCGGGCCGTGCGCATCCACGGTCCGGAACACTTCCTGGCCTGCAACAGCATCCTCAGCTGCCACGCCGCGCCCATCTTCTCGGCCACCGGCGAGATCCTCGGCATCCTGGACCTGTCCGGGCCCGCCGACGACATGCGCGACTATGTGCTGGCCCTGGTGCAGCGCATGGCGCGGGGCATCTCCGACCAGATCCTGGGCGACAGTCCGCTGCGCCGGCTGGACTTCCGCCTCGGCCGGGGCCCGGAAGACGACACGCACGCCCTCCTGCTGCTGGATGACGACGCCCGCATCGCCGGCGCCAACGAAGCCGCCCTGCAGGCGCTGGATGCCGACTGGAGCCGCCTCATCGGCACGCCGTGCGCGCAATGGATAGCCGGGCCGCTGCATGCCCGGGACACGCCCTTGCACCGCCACGACGGCCACCCGCTCACCGGCCGGCTGATTCCGCCGCCGCACGCGCCGGCGCGGCCGGCTCCAGCCGCGCAGCACCCGGCGCCCGCGTCCCGGCCGACTCCGCGTCCGGCGGCGCGCGCCCTGCCCGAACCTGATGCCGTCAGCGCCCCGCTGCTGGATCAGGCCGTGCGCGCCCTGGACTCGGGCCTGGCCGTCCTGCTGTGCGGCGAAACCGGCACGGGAAAGGAAGTCCTGTCGCGCCACATCCATGCCCGCAGCGCCTGGAGCGCCGGCCCCTTCATCGCCATCAACTGCGCCGCGCTGCCGGAACACCTGGTCGAATCCGAGCTGTTCGGCTACGAGCCGGGCGCTTTCACCGGCGCCCGCCGCGAAGGCGCGCGCGGCCTGCTGCGGCAGGCGCAGGGCGGCGTGCTGTTCCTGGACGAGATCGGCGACATGCCGCTGGCGCTGCAGACCCGGCTGCTGCGGGTCCTGCAGGAACGCGAGGTCCAGCCCCTGGGGTCGGACAAGCGCATCCCTCTGGAATTCGGCCTGGTCAGCGCCAGCCACCAGGACCTGAAGGCGCTGGTGGCCCAGGGACGGTTCCGCGCCGACCTGTACTACCGGCTGCAGGACATGCCGCTGCATCTGCCGCCGCTGCGCGGTCGATCCGACCTGGCGGCCTTCATCGAGGACGCCTACCAGGCCCTGGAAGGAAGCCTGTCCGGCGACGCGCTCGCCCTGCTGGCCCGCCATGGATGGCCGGGCAACTACCGCGAACTGTTCAGCGTGCTGCGGCGGCTGCGCTGCCAGCATCCCGGGCCGGACCCCGTCATGGCCGACGGCCTGCCCGTGGACATCGCCGGCGGCCCGCTCGCGGGCGCTGTGTCGCCGGCATCCGCGCCGTCCAACGGATCACCCGGACACGATCCGATCGCGTCCGCCGCAACGGCGCTTCAGAAGGACGAGGAGCCCGAGGCCGGTACCGATCTGCGCGCGCTGGAGCGCCAGGCCATTGAGCAAACCCTGCGCGCCTGCCAGGGCAACATCAGCCGCGCGGCGCGCCACCTGGGCATCCACCGCAGCACCTTGTACCGCAAGCTGCAATGA
PROTEIN sequence
Length: 630
MLHSPPLALAPDARAQAATRIHQSWARCADLDPALLADPNPLPRADLDMRREAHRQLLRLAEPSLGALSALAGSMHSVVLLADASGLILHERGSHSFQDKARRVALQPGVNWAEPLRGTNAIGTALHDGRAVRIHGPEHFLACNSILSCHAAPIFSATGEILGILDLSGPADDMRDYVLALVQRMARGISDQILGDSPLRRLDFRLGRGPEDDTHALLLLDDDARIAGANEAALQALDADWSRLIGTPCAQWIAGPLHARDTPLHRHDGHPLTGRLIPPPHAPARPAPAAQHPAPASRPTPRPAARALPEPDAVSAPLLDQAVRALDSGLAVLLCGETGTGKEVLSRHIHARSAWSAGPFIAINCAALPEHLVESELFGYEPGAFTGARREGARGLLRQAQGGVLFLDEIGDMPLALQTRLLRVLQEREVQPLGSDKRIPLEFGLVSASHQDLKALVAQGRFRADLYYRLQDMPLHLPPLRGRSDLAAFIEDAYQALEGSLSGDALALLARHGWPGNYRELFSVLRRLRCQHPGPDPVMADGLPVDIAGGPLAGAVSPASAPSNGSPGHDPIASAATALQKDEEPEAGTDLRALERQAIEQTLRACQGNISRAARHLGIHRSTLYRKLQ*