ggKbase home page

SCNpilot_solid_1_scaffold_20_19

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(15461..16360)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GMX4_PUSST similarity UNIREF
DB: UNIREF100
  • Identity: 63.4
  • Coverage: 298.0
  • Bit_score: 384
  • Evalue 7.20e-104
  • rbh
LysR family transcriptional regulator YeiE similarity KEGG
DB: KEGG
  • Identity: 85.3
  • Coverage: 299.0
  • Bit_score: 502
  • Evalue 6.70e-140
  • rbh
LysR family transcriptional regulator YeiE {ECO:0000313|EMBL:CDM24868.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source similarity UNIPROT
DB: UniProtKB
  • Identity: 85.3
  • Coverage: 299.0
  • Bit_score: 502
  • Evalue 3.30e-139

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 900
ATGATCGGCTTGAGCATCCGCCAGCTGGAAGTCTTCGACGCCGTCGCCACCACCGGCAGCGTGCGCCGGGCGGCCGAGCAACTGCACCTGACGCAGCCGGCCATCAGCATGGCGCTGGCGGAACTGGAACGGCAGCTGGGCAGCACGCTGTTCGACCGCGAACGCGGCCGGCTGCGCCTGAACGCGCAGGGCGCCGAACAGCTGCCCCTGGCCCGGGAGATCCTGGAACGCCTGCAGGACATGCAGCGCCGCCACCCCGGCACCCGGGAAGCCCTGAGCGGCGCCTTGCGCATCGGCGCCAGCAACACGGTGGGCAACTACCTGGTGGGGGAACTTCTGGGCCCCATCGTGGCCCAACATCCCATGATCGCGCTGCATCTCACAGTGGACAATACGCGGGAGATCGTCGCCATGCTGCTGGACCACGCCATCGACATCGCCTGCGTCGAAGGCCCCGTCCATCATGCGCGGCTGGAAACCCTGGCCTGGCGCAGCGACGCCCTGGTCGTCTGCGCGGCGCCCTCGCATCCGCTGGCCCGGCGCTCGCGGCTGAAGGCCCAGGATTTCGCGGATGCCCACTGGATCCTGCGCGAACGCGGATCCGCCACCCGCACCCTGACCGAACAGGCGCTGACCGCCCTGCCGCCCGGCCGCATCCTGCTGGAGCTGGGCCAGATCGAAGCCATCAAGCAGGCCGTCATCGCCGGCCTGGGGATCGCCTGCCTGCCCTACGCGGCTACGCTGGACGCCGTCGCCACCGGCCGGCTGCGGGTGCTGCGCACCCCTTTCCTGAACCTGGACCGGCGCCTGTCGCTGGTGCTGCACCGCAGCCGCTATCGCGGTACGCTCATCGAGGCATTTCTACATTCCCTGGAGGTCGACACCCATGCCCAAGACTGA
PROTEIN sequence
Length: 300
MIGLSIRQLEVFDAVATTGSVRRAAEQLHLTQPAISMALAELERQLGSTLFDRERGRLRLNAQGAEQLPLAREILERLQDMQRRHPGTREALSGALRIGASNTVGNYLVGELLGPIVAQHPMIALHLTVDNTREIVAMLLDHAIDIACVEGPVHHARLETLAWRSDALVVCAAPSHPLARRSRLKAQDFADAHWILRERGSATRTLTEQALTALPPGRILLELGQIEAIKQAVIAGLGIACLPYAATLDAVATGRLRVLRTPFLNLDRRLSLVLHRSRYRGTLIEAFLHSLEVDTHAQD*