ggKbase home page

SCNpilot_solid_1_scaffold_20

Search features with annotation key words

Displaying items 1-30 of 199 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_20_1
unknown

Not on your lists

587..742
DNA (156bp) protein (52aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_20_2
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1295..1600)
DNA (306bp) protein (102aa)
Uncharacterized protein n=3 Tax=Alcaligenes RepID=J0B957_ALCFA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM23833.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_20_3
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2062..2223
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CVV7_9BACT
putative transmembrane protein
UPF0391 membrane protein BN940_11256 {ECO:0000256|HAMAP-Rule:MF_01361}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="
SCNpilot_solid_1_scaffold_20_4
Burkholderia sacchari, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2431..2811)
DNA (381bp) protein (127aa)
Hypothetical signal peptide protein n=2 Tax=Burkholderia thailandensis RepID=Q2T8A7_BURTA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KHD19476.1}; TaxID=159450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sacch
SCNpilot_solid_1_scaffold_20_5
Achromobacter arsenitoxydans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3052..3204
DNA (153bp) protein (51aa)
Vir-repressed protein n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0FDR0_9BURK
Vir-repressed protein {ECO:0000313|EMBL:EHK63571.1}; TaxID=477184 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter arsenit
vir-repressed protein
SCNpilot_solid_1_scaffold_20_6
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3212..4030)
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B41FEF
universal stress protein Tax=GWD2_Deltaproteobacteria_55_8_curated
universal stress protein
SCNpilot_solid_1_scaffold_20_7
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4342..5205
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TV55_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV00587.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source=
SCNpilot_solid_1_scaffold_20_8
Legionella massiliensis, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5214..5606)
DNA (393bp) protein (131aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDZ76606.1}; TaxID=1034943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella massiliensi
hypothetical protein FdumT_02058 id=4225911 bin=GWC2_Alphaproteobacteria_42_16 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
SCNpilot_solid_1_scaffold_20_9
Pseudomonas alcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5640..7001)
DNA (1362bp) protein (454aa)
Uncharacterized protein n=1 Tax=Pseudomonas alcaligenes NBRC 14159 RepID=U3B6E6_PSEAC rbh
Uncharacterized protein {ECO:0000313|EMBL:GAD62468.1}; TaxID=1215092 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas alcal
metallo-beta-lactamase
SCNpilot_solid_1_scaffold_20_10
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7180..7554)
DNA (375bp) protein (125aa)
endonuclease n=1 Tax=Pusillimonas noertemannii RepID=UPI00031C3663
Putative deoxyribonuclease V {ECO:0000313|EMBL:KCV60842.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronc
endonuclease
SCNpilot_solid_1_scaffold_20_11
Advenella mimigardefordensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7678..8076
DNA (399bp) protein (133aa)
UPF0225 protein AXXA_02872 n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7SV84_ALCXX
hypothetical protein
UPF0225 protein MIM_c35540 {ECO:0000256|HAMAP-Rule:MF_00612}; TaxID=1247726 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella mimigardefordens
SCNpilot_solid_1_scaffold_20_12
unknown

Not on your lists

comp(8073..8252)
DNA (180bp) protein (60aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_20_13
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8360..9958)
DNA (1599bp) protein (533aa)
Multidrug resistance protein B n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GMF8_PUSST rbh
Inner membrane component of tripartite multidrug resistance system rbh
Inner membrane component of tripartite multidrug resistance system {ECO:0000313|EMBL:CDM24874.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae;
SCNpilot_solid_1_scaffold_20_14
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9955..11142)
DNA (1188bp) protein (396aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GMF9_PUSST rbh
Membrane fusion component of tripartite multidrug resistance system rbh
Membrane fusion component of tripartite multidrug resistance system {ECO:0000313|EMBL:CDM24873.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae;
SCNpilot_solid_1_scaffold_20_15
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11158..12609)
DNA (1452bp) protein (484aa)
Outer membrane efflux protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GMG0_PUSST rbh
Outer membrane component of tripartite multidrug resistance system rbh
Outer membrane component of tripartite multidrug resistance system {ECO:0000313|EMBL:CDM24872.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae;
SCNpilot_solid_1_scaffold_20_16
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12718..13266)
DNA (549bp) protein (183aa)
MarR family transcriptional regulator n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GMG1_PUSST
Transcriptional regulator, MarR family
Transcriptional regulator, MarR family {ECO:0000313|EMBL:CDM24871.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Ca
SCNpilot_solid_1_scaffold_20_17
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13310..14260
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GMG2_PUSST rbh
Permease of the drug/metabolite transporter superfamily rbh
Permease of the drug/metabolite transporter superfamily {ECO:0000313|EMBL:CDM24870.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellanie
SCNpilot_solid_1_scaffold_20_18
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14287..15474)
DNA (1188bp) protein (396aa)
Patatin n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GMX3_PUSST rbh
Ferredoxin reductase rbh
Ferredoxin reductase {ECO:0000313|EMBL:CDM24869.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defra
SCNpilot_solid_1_scaffold_20_19
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15461..16360)
DNA (900bp) protein (300aa)
Transcriptional regulator n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GMX4_PUSST rbh
LysR family transcriptional regulator YeiE rbh
LysR family transcriptional regulator YeiE {ECO:0000313|EMBL:CDM24868.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source
SCNpilot_solid_1_scaffold_20_20
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16517..17587
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GMX5_PUSST rbh
Putative membrane protein YeiH rbh
Putative membrane protein YeiH {ECO:0000313|EMBL:CDM24464.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellani
SCNpilot_solid_1_scaffold_20_21
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17666..18052)
DNA (387bp) protein (129aa)
Putative membrane protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GMX6_PUSST
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM24867.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_20_22
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18219..20006)
DNA (1788bp) protein (596aa)
hypothetical protein n=1 Tax=beta proteobacterium L13 RepID=UPI00036B1B3B rbh
Alkanesulfonates ABC transporter ATP-binding protein / Sulfonate ABC transporter, ATP-binding subunit SsuB rbh
Alkanesulfonates ABC transporter ATP-binding protein / Sulfonate ABC transporter, ATP-binding subunit SsuB {ECO:0000313|EMBL:CDM24866.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobac
SCNpilot_solid_1_scaffold_20_23
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20096..21664)
DNA (1569bp) protein (523aa)
Anaerobic nitric oxide reductase transcription regulator n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GMY1_PUSST rbh
Anaerobic nitric oxide reductase transcription regulator NorR rbh
Anaerobic nitric oxide reductase transcription regulator NorR {ECO:0000313|EMBL:CDM24865.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Caste
SCNpilot_solid_1_scaffold_20_24
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21859..24138
DNA (2280bp) protein (760aa)
Nitric-oxide reductase, quinol-dependent (EC:1.7.2.5) rbh
Nitric-oxide reductase, quinol-dependent {ECO:0000313|EMBL:CDM24864.1}; EC=1.7.2.5 {ECO:0000313|EMBL:CDM24864.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
Nitric oxide reductase large subunit n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T708_ACIDE rbh
SCNpilot_solid_1_scaffold_20_25
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24359..25027)
DNA (669bp) protein (223aa)
DSBA oxidoreductase n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002D2C186 rbh
putative dithiol-disulfide isomerase involved in polyketide biosynthesis Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
DSBA-like thioredoxin domain protein
SCNpilot_solid_1_scaffold_20_26
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25064..26101)
DNA (1038bp) protein (346aa)
6-phosphogluconate dehydrogenase-like protein; K00033 6-phosphogluconate dehydrogenase [EC:1.1.1.44] Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
6-phosphogluconate dehydrogenase (Decarboxylating) n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21R72_RHOFD rbh
6-phosphogluconate dehydrogenase-like protein
SCNpilot_solid_1_scaffold_20_27
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26163..27452)
DNA (1290bp) protein (430aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002F55952 rbh
Predicted hydroxymethylpyrimidine transporter CytX rbh
Predicted hydroxymethylpyrimidine transporter CytX {ECO:0000313|EMBL:CDM24862.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;
SCNpilot_solid_1_scaffold_20_28
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27729..28142)
DNA (414bp) protein (138aa)
Aspartate 1-decarboxylase (EC:4.1.1.11)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI00031D75D5
SCNpilot_solid_1_scaffold_20_29
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28252..29028)
DNA (777bp) protein (259aa)
Lipoate-protein ligase A n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GMY6_PUSST
Lipoate-protein ligase A rbh
Lipoate-protein ligase A {ECO:0000313|EMBL:CDM24858.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella d
SCNpilot_solid_1_scaffold_20_30
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29028..29498)
DNA (471bp) protein (157aa)
TM2 domain-containing protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GMY7_PUSST
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM24857.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
Displaying items 1-30 of 199 in total

View Taxonomy