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SCNpilot_solid_1_scaffold_20

Search features with annotation key words

Displaying items 181-199 of 199 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_20_180
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

186327..187346
DNA (1020bp) protein (340aa)
LysR family transcriptional regulator n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GV43_PUSST rbh
LysR family transcriptional regulator
LysR family transcriptional regulator {ECO:0000313|EMBL:AEC18685.1}; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusil
SCNpilot_solid_1_scaffold_20_trna_1
unknown

Not on your lists

comp(187390..187471)
DNA (82bp)
transferRNA
SCNpilot_solid_1_scaffold_20_181
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

187586..188896
DNA (1311bp) protein (437aa)
Cell division trigger factor (EC:5.2.1.8) rbh
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000313|EMBL:CDM24701.1};
trigger factor n=1 Tax=Pusillimonas noertemannii RepID=UPI0002DF277A rbh
SCNpilot_solid_1_scaffold_20_182
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

188896..189555
DNA (660bp) protein (220aa)
ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92) rbh
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000313|EMBL:CDM24700.1};; Endopepti
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GPD7_PUSST rbh
SCNpilot_solid_1_scaffold_20_183
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

189569..190864
DNA (1296bp) protein (432aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GPD8_PUSST rbh
ATP-dependent Clp protease ATP-binding subunit ClpX rbh
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderial
SCNpilot_solid_1_scaffold_20_184
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

191022..193481
DNA (2460bp) protein (820aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HA
ATP-dependent protease La Type I (EC:3.4.21.53) rbh
Lon protease n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GPD9_PUSST rbh
SCNpilot_solid_1_scaffold_20_185
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(193717..194436)
DNA (720bp) protein (240aa)
SOS-response repressor and protease LexA (EC:3.4.21.88) rbh
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008101}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008054};; TaxID=1437824 species="Bacteria; Proteo
LexA repressor n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GPE4_PUSST
SCNpilot_solid_1_scaffold_20_186
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(194639..195844)
DNA (1206bp) protein (402aa)
Aromatic-amino-acid aminotransferase (EC:2.6.1.57) rbh
Aromatic-amino-acid aminotransferase {ECO:0000313|EMBL:CDM24696.1}; EC=2.6.1.57 {ECO:0000313|EMBL:CDM24696.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Al
Aromatic-amino-acid aminotransferase n=1 Tax=Bordetella bronchiseptica 1289 RepID=K4U3X7_BORBO rbh
SCNpilot_solid_1_scaffold_20_187
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

195939..198023
DNA (2085bp) protein (695aa)
UvrABC system protein B n=6 Tax=Bordetella bronchiseptica RepID=UVRB_BORBR rbh
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_0
Excinuclease ABC subunit B rbh
SCNpilot_solid_1_scaffold_20_188
Bordetella parapertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

198155..198643
DNA (489bp) protein (163aa)
ptpA; low molecular weight protein-tyrosine-phosphatase (EC:3.1.3.48)
Low molecular weight protein-tyrosine-phosphatase {ECO:0000313|EMBL:CCJ49485.1}; EC=3.1.3.48 {ECO:0000313|EMBL:CCJ49485.1};; TaxID=1208660 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkho
Low molecular weight protein-tyrosine-phosphatase n=4 Tax=Bordetella RepID=K0MI20_BORPB
SCNpilot_solid_1_scaffold_20_189
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

198896..199411
DNA (516bp) protein (172aa)
Putative DNA-binding protein n=1 Tax=Bordetella avium (strain 197N) RepID=Q2L241_BORA1
Iron-sulfur cluster regulator IscR rbh
Iron-sulfur cluster regulator IscR {ECO:0000313|EMBL:CDM24692.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castel
SCNpilot_solid_1_scaffold_20_190
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

199432..200652
DNA (1221bp) protein (407aa)
Cysteine desulfurase (EC:2.8.1.7) rbh
Cysteine desulfurase IscS {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000256|SAAS:SAAS00038344}; EC=2.8.1.7 {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000256|SAAS:SAAS00063383};; TaxID=1437824 species="Bacteri
Cysteine desulfurase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GPE9_PUSST
SCNpilot_solid_1_scaffold_20_191
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

200652..201038
DNA (387bp) protein (129aa)
Iron-sulfur cluster assembly scaffold protein IscU n=2 Tax=Taylorella asinigenitalis RepID=G4QAZ1_TAYAM
FeS cluster assembly scaffold IscU
FeS cluster assembly scaffold IscU {ECO:0000313|EMBL:CDM24690.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castel
SCNpilot_solid_1_scaffold_20_192
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

201067..201390
DNA (324bp) protein (108aa)
Iron-sulfur cluster assembly protein n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7TA53_ALCXX
Iron binding protein IscA
Iron binding protein IscA {ECO:0000313|EMBL:CDM24689.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella
SCNpilot_solid_1_scaffold_20_193
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(201463..202980)
DNA (1518bp) protein (506aa)
Lysyl-tRNA synthetase (class II) (EC:6.1.1.6) rbh
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|H
Lysine--tRNA ligase n=1 Tax=Alcaligenes faecalis subsp. faecalis NCIB 8687 RepID=J0JH77_ALCFA rbh
SCNpilot_solid_1_scaffold_20_194
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(203046..203792)
DNA (747bp) protein (249aa)
Peptide chain release factor 2 n=1 Tax=Achromobacter piechaudii HLE RepID=J4YEW0_9BURK rbh
Peptide chain release factor 2
Peptide chain release factor 2 {ECO:0000256|HAMAP-Rule:MF_00094, ECO:0000256|SAAS:SAAS00020438}; Short=RF-2 {ECO:0000256|HAMAP-Rule:MF_00094};; TaxID=1437824 species="Bacteria; Proteobacteria; Betapro
SCNpilot_solid_1_scaffold_20_195
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

204294..205424
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NU47_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS30980.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
SCNpilot_solid_1_scaffold_20_196
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(205421..207067)
DNA (1647bp) protein (549aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002FDCECA rbh
methyl-accepting chemotaxis sensory transducer rbh
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:CDM24685.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" so
SCNpilot_solid_1_scaffold_20_197
unknown

Not on your lists

comp(207160..207255)
DNA (96bp) protein (32aa)

This feature has no annotations

Displaying items 181-199 of 199 in total

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