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SCNpilot_solid_1_scaffold_20

Search features with annotation key words

Displaying items 121-150 of 199 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_20_120
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(117400..118485)
DNA (1086bp) protein (362aa)
Tetraacyldisaccharide 4'-kinase (EC:2.7.1.130) rbh
Tetraacyldisaccharide 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093884}; EC=2.7.1.130 {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093878};; Lipid A 4'-kinase {ECO
Tetraacyldisaccharide 4'-kinase n=2 Tax=Alcaligenes RepID=M5J2G4_9BURK rbh
SCNpilot_solid_1_scaffold_20_121
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(118482..118895)
DNA (414bp) protein (138aa)
Biopolymer transport protein n=2 Tax=Bordetella holmesii RepID=M5NQD8_9BORD
Biopolymer transport protein ExbD/TolR
Biopolymer transport protein ExbD/TolR {ECO:0000313|EMBL:CDM24758.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Ca
SCNpilot_solid_1_scaffold_20_122
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(118892..119500)
DNA (609bp) protein (203aa)
Biopolymer transport protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GPA2_PUSST
MotA/TolQ/ExbB proton channel family protein rbh
MotA/TolQ/ExbB proton channel family protein {ECO:0000313|EMBL:CDM24757.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" sour
SCNpilot_solid_1_scaffold_20_123
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

119846..121150
DNA (1305bp) protein (435aa)
Exodeoxyribonuclease VII large subunit (EC:3.1.11.6) rbh
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclea
Exodeoxyribonuclease 7 large subunit n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GPA4_PUSST rbh
SCNpilot_solid_1_scaffold_20_124
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

121199..121777
DNA (579bp) protein (193aa)
Superoxide dismutase [Fe] (EC:1.15.1.1) rbh
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414, ECO:0000313|EMBL:CDM24755.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Bu
Superoxide dismutase [Fe] n=32 Tax=Bordetella RepID=SODF_BORPE
SCNpilot_solid_1_scaffold_20_125
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(121877..122332)
DNA (456bp) protein (152aa)
Putative ACR, COG1430 n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7RX05_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM24753.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_20_126
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(122412..122651)
DNA (240bp) protein (80aa)
Cold-shock protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GPA8_PUSST
Cold shock protein CspD
Cold shock protein CspD {ECO:0000313|EMBL:CDM24751.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_20_127
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

122785..123108
DNA (324bp) protein (108aa)
ATP-dependent Clp protease adapter protein ClpS n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GPA9_PUSST
ATP-dependent Clp protease adaptor protein ClpS
ATP-dependent Clp protease adapter protein ClpS {ECO:0000256|HAMAP-Rule:MF_00302}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.
SCNpilot_solid_1_scaffold_20_128
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

123235..125553
DNA (2319bp) protein (773aa)
ATP-dependent Clp protease ATP-binding protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GPB0_PUSST rbh
ATP-dependent Clp protease ATP-binding subunit ClpA {ECO:0000313|EMBL:CDM24749.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.
ATP-dependent Clp protease ATP-binding subunit ClpA rbh
SCNpilot_solid_1_scaffold_20_129
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

125553..126806
DNA (1254bp) protein (418aa)
Paraquat-inducible protein A n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GPB1_PUSST rbh
Paraquat-inducible protein A rbh
Paraquat-inducible protein A {ECO:0000313|EMBL:CDM24748.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniel
SCNpilot_solid_1_scaffold_20_130
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

126796..128484
DNA (1689bp) protein (563aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002DAD536 rbh
Paraquat-inducible protein B rbh
Paraquat-inducible protein B {ECO:0000313|EMBL:CDM24747.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniel
SCNpilot_solid_1_scaffold_20_131
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

128522..129169
DNA (648bp) protein (216aa)
Lipoprotein n=1 Tax=Bordetella bronchiseptica 253 RepID=K4QEC9_BORBO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM24746.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_20_132
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

129293..133075
DNA (3783bp) protein (1261aa)
Transcriptional repressor of PutA and PutP / Proline dehydrogenase / Delta-1-pyrroline-5-carboxylate dehydrogenase {ECO:0000313|EMBL:CDM24745.1}; EC=1.2.1.88 {ECO:0000313|EMBL:CDM24745.1};; TaxID=1437
Transcriptional repressor of PutA and PutP / Proline dehydrogenase / Delta-1-pyrroline-5-carboxylate dehydrogenase (EC:1.2.1.88 1.5.99.8) rbh
Pyrroline-5-carboxylate dehydrogenase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GPB4_PUSST rbh
SCNpilot_solid_1_scaffold_20_133
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(133288..133569)
DNA (282bp) protein (94aa)
Peptidyl-prolyl cis-trans isomerase PpiC (EC:5.2.1.8)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00015172}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00015172, ECO:0000313|EMBL:CDM24744.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria;
Peptidyl-prolyl cis-trans isomerase C n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IDD8_BORPD
SCNpilot_solid_1_scaffold_20_134
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(133637..134347)
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI00038091ED rbh
Branched-chain amino acid transport ATP-binding protein LivF rbh
Branched-chain amino acid transport ATP-binding protein LivF {ECO:0000313|EMBL:CDM24742.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castel
SCNpilot_solid_1_scaffold_20_135
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(134344..135189)
DNA (846bp) protein (282aa)
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI00037B7395 rbh
Branched-chain amino acid transport ATP-binding protein LivG rbh
Branched-chain amino acid transport ATP-binding protein LivG {ECO:0000313|EMBL:CDM24741.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castel
SCNpilot_solid_1_scaffold_20_136
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(135186..136184)
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI000363342F rbh
Branched-chain amino acid transport system permease protein LivM rbh
Branched-chain amino acid transport system permease protein LivM {ECO:0000313|EMBL:CDM24740.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Ca
SCNpilot_solid_1_scaffold_20_137
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(136188..137090)
DNA (903bp) protein (301aa)
ABC transporter permease n=1 Tax=Bordetella sp. FB-8 RepID=UPI00037434DA rbh
High-affinity branched-chain amino acid transport system permease protein LivH rbh
High-affinity branched-chain amino acid transport system permease protein LivH {ECO:0000313|EMBL:CDM24739.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alca
SCNpilot_solid_1_scaffold_20_138
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(137350..138498)
DNA (1149bp) protein (383aa)
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI00037C5AD0 rbh
Branched-chain amino acid ABC transporter, amino acid-binding protein rbh
Branched-chain amino acid ABC transporter, amino acid-binding protein {ECO:0000313|EMBL:CDM24737.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenacea
SCNpilot_solid_1_scaffold_20_139
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(138781..139245)
DNA (465bp) protein (155aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule
deoxyuridine 5''''-triphosphate nucleotidohydrolase n=1 Tax=Pusillimonas noertemannii RepID=UPI000319C535
SCNpilot_solid_1_scaffold_20_140
Achromobacter sp. RTa, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(139329..139652)
DNA (324bp) protein (108aa)
Uncharacterized protein n=2 Tax=Pseudogulbenkiania RepID=B9Z6L0_9NEIS
Uncharacterized protein {ECO:0000313|EMBL:KGD90137.1}; TaxID=1532557 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp.
hypothetical protein
SCNpilot_solid_1_scaffold_20_141
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(139732..140931)
DNA (1200bp) protein (400aa)
Phosphopantothenoylcysteine decarboxylase / Phosphopantothenoylcysteine synthetase (EC:4.1.1.36 6.3.2.5) rbh
Phosphopantothenoylcysteine decarboxylase / Phosphopantothenoylcysteine synthetase {ECO:0000313|EMBL:CDM24735.1}; EC=4.1.1.36 {ECO:0000313|EMBL:CDM24735.1};; EC=6.3.2.5 {ECO:0000313|EMBL:CDM24735.1};;
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002DF6007 rbh
SCNpilot_solid_1_scaffold_20_142
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(140942..141523)
DNA (582bp) protein (194aa)
Lipoprotein signal peptidase (EC:3.4.23.36)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal pep
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI000370051E
SCNpilot_solid_1_scaffold_20_143
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(141516..144356)
DNA (2841bp) protein (947aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0
Isoleucine--tRNA ligase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GPC4_PUSST rbh
isoleucyl-tRNA synthetase rbh
SCNpilot_solid_1_scaffold_20_144
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(144346..145311)
DNA (966bp) protein (322aa)
Riboflavin kinase / FMN adenylyltransferase (EC:2.7.1.26 2.7.7.2) rbh
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491, ECO:0000313|EMBL:CDM24732.1};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491, ECO:0000313|EMBL:
Bifunctional riboflavin kinase/FMN adenylyltransferase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GPC5_PUSST rbh
SCNpilot_solid_1_scaffold_20_145
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

145369..146061
DNA (693bp) protein (231aa)
Phosphoribosylglycinamide formyltransferase (EC:2.1.2.2) rbh
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930, ECO:0000313|EMBL:CDM24731.1}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930, ECO:0000313|EMBL:CDM24731.1};; 5'-phosphoribosy
Phosphoribosylglycinamide formyltransferase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GPC6_PUSST
SCNpilot_solid_1_scaffold_20_146
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

146048..147553
DNA (1506bp) protein (502aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GPC7_PUSST rbh
Ribosomal RNA small subunit methyltransferase B rbh
Ribosomal RNA small subunit methyltransferase B {ECO:0000313|EMBL:CDM24730.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" s
SCNpilot_solid_1_scaffold_20_147
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

147666..148874
DNA (1209bp) protein (403aa)
Fatty acid desaturase; Delta-9 fatty acid desaturase (EC:1.14.19.1) rbh
Fatty acid desaturase Delta-9 fatty acid desaturase {ECO:0000313|EMBL:CDM24728.1}; EC=1.14.19.1 {ECO:0000313|EMBL:CDM24728.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Bur
Fatty acid desaturase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GPC8_PUSST rbh
SCNpilot_solid_1_scaffold_20_148
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

148871..151234
DNA (2364bp) protein (788aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castel
DNA helicase II n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GPC9_PUSST rbh
ATP-dependent DNA helicase UvrD/PcrA rbh
SCNpilot_solid_1_scaffold_20_149
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(151235..152011)
DNA (777bp) protein (259aa)
ABC transporter permease n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VPU6_9GAMM rbh
Alkanesulfonates transport system permease protein rbh
Alkanesulfonates transport system permease protein {ECO:0000313|EMBL:CDM24721.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;
Displaying items 121-150 of 199 in total

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