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SCNpilot_solid_1_scaffold_20_126

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(122412..122651)

Top 3 Functional Annotations

Value Algorithm Source
Cold-shock protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GPA8_PUSST similarity UNIREF
DB: UNIREF100
  • Identity: 88.8
  • Coverage: 80.0
  • Bit_score: 147
  • Evalue 6.70e-33
Cold shock protein CspD similarity KEGG
DB: KEGG
  • Identity: 98.7
  • Coverage: 79.0
  • Bit_score: 161
  • Evalue 7.40e-38
Cold shock protein CspD {ECO:0000313|EMBL:CDM24751.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de similarity UNIPROT
DB: UniProtKB
  • Identity: 98.7
  • Coverage: 79.0
  • Bit_score: 161
  • Evalue 3.70e-37

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 240
ATGTCGGAATCCATCGAAAACACCGGAGAGTCACAAAAACTGACCGGCACGGTTAAATGGTTCAATGACGCCAAGGGCTTTGGCTTCATTACCCCTGACAACGGGGGCGAAGACCTTTTTGCTCATTTTTCATCGATCCAGATGAACGGCTTCAAAACCCTGAAAGAGGGCCAGAAAGTCGCTTTCGATATCGCGCAGGGTCCGAAAGGCAAACAAGCCCTGAATATTACCGCCGCCTGA
PROTEIN sequence
Length: 80
MSESIENTGESQKLTGTVKWFNDAKGFGFITPDNGGEDLFAHFSSIQMNGFKTLKEGQKVAFDIAQGPKGKQALNITAA*