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SCNpilot_solid_1_scaffold_20_121

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(118482..118895)

Top 3 Functional Annotations

Value Algorithm Source
Biopolymer transport protein n=2 Tax=Bordetella holmesii RepID=M5NQD8_9BORD similarity UNIREF
DB: UNIREF100
  • Identity: 53.7
  • Coverage: 134.0
  • Bit_score: 139
  • Evalue 1.80e-30
Biopolymer transport protein ExbD/TolR similarity KEGG
DB: KEGG
  • Identity: 72.3
  • Coverage: 137.0
  • Bit_score: 192
  • Evalue 8.80e-47
Biopolymer transport protein ExbD/TolR {ECO:0000313|EMBL:CDM24758.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Ca similarity UNIPROT
DB: UniProtKB
  • Identity: 72.3
  • Coverage: 137.0
  • Bit_score: 192
  • Evalue 4.40e-46

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 414
ATGAACTTCCGCCACCGCCATTCCCACGAAGATCCGGAGATCAACCTGATCCCCCTGATCGACGTCCTGCTGGTGATCCTGATCTTCCTGGCGGCGACCACGTCCTTCACGCAGACGCGCCAGCTGCCCATCGCCCTGCCCCAGGCCCAGGCGCAGGTCCTGGATGCCGGTCCGGCGCTGGAACTGGCCATCAGCCGCGACGGGCAATACGCCCTGGATGGGCATTACATCGACAACGCCGCGCCGGACGCCCTGGCGGCGGCGCTGCGCCGAGCGGCCGCCGACCGCCCCGACGCGCCGCTGCGCATCGACGCGGACGGCCAGGCTTCCCACACGACCGTGGTGCAGGCCCTGGAAGCCGCCCGCCAGGCCGACATCCGCAAGATCTCCTTCCTCACCCAGGGCCGCCCATGA
PROTEIN sequence
Length: 138
MNFRHRHSHEDPEINLIPLIDVLLVILIFLAATTSFTQTRQLPIALPQAQAQVLDAGPALELAISRDGQYALDGHYIDNAAPDALAAALRRAAADRPDAPLRIDADGQASHTTVVQALEAARQADIRKISFLTQGRP*